RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 KCNMB1Q16558 191 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 NLRC3Q7RTR2 1065 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CATSPERDQ86XM0 798 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 OR10S1Q8NGN2 331 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 OR2T35Q8NGX2 323 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 PPP1R14AQ96A00 147 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 NARFLQ9H6Q4 476 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CA10Q9NS85 328 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CYB5R1Q9UHQ9 305 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ELF5Q9UKW6 265 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-230ENST00000488543 SPATA2Q9UM82 520 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 SLC22A13Q9Y226 551 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CACNA1AO00555 2505 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 TRBV5-7A0A0A0MS05 114 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 MEIS3P1A6NDR6 274 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 NPIPA2E9PIF3 369 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 NPIPA3F8WFD2 350 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CDK2AP1O14519 115 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF254O75437 659 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 RAF1P04049 648 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ANXA7P20073 488 aaKnown RBP10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CARD18P57730 90 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 RASGEF1BQ0VAM2 473 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 Q499Y3 187 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CD276Q5ZPR3 534 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ABLIM2Q6H8Q1 611 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 LUZP2Q86TE4 346 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 TMEM178AQ8NBL3 297 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 OR52B4Q8NGK2 314 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 OR10D3Q8NH80 312 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 SMIM4Q8WVI0 70 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 RNF133Q8WVZ7 376 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 EXTL1Q92935 676 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-230ENST00000488543 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 GLTPQ9NZD2 209 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 B4GALT7Q9UBV7 327 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CAMK2AQ9UQM7 478 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 SVILO95425 2214 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF716A6NP11 495 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 TEX46H3BTG2 121 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SULT1A3P0DMM9 295 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SULT1A4P0DMN0 295 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 ADRA2CP18825 462 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 UBE2MP61081 183 aaKnown RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 UBE2NLQ5JXB2 153 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 BTN2A1Q7KYR7 527 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF676Q8N7Q3 588 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 OR10H5Q8NGA6 315 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 OR51A4Q8NGJ6 313 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 FAM122AQ96E09 287 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF845Q96IR2 970 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SF3B5Q9BWJ5 86 aaKnown RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 FOXD3Q9UJU5 478 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 NBEAQ8NFP9 2946 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 IFITM5A6NNB3 132 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 K7ENP7 123 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 RRP8O43159 456 aaKnown RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 DOK2O60496 412 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 MAS1P04201 325 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 NTF4P34130 210 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 EIF1AXP47813 144 aaKnown RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 LHX2P50458 406 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 C3AR1Q16581 482 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 C10orf128Q5T292 105 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 INO80CQ6PI98 192 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-230ENST00000488543 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 CFAP77Q6ZQR2 320 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 FOXL2NBQ6ZUU3 175 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SYNPRQ8TBG9 265 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SUN5Q8TC36 379 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 ROBO4Q8WZ75 1007 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 COMMD4Q9H0A8 199 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 SEC61A2Q9H9S3 476 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 OR5V1Q9UGF6 321 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 R4GMQ9 66 aa10.72□□□□□ -0.69
HDAC6-230ENST00000488543 MEIKINA0A087WXM9 373 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 LINC01387J3KSC0 135 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 TPOP07202 933 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 CDK2P24941 298 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 ARPC4P59998 168 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 SLC10A1Q14973 349 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 SIGIRRQ6IA17 410 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 CHMP1BQ7LBR1 199 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 FTMTQ8N4E7 242 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 ABHD17AQ96GS6 310 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 GAL3ST1Q99999 423 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 G6PC2Q9NQR9 355 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 GDF2Q9UK05 429 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-230ENST00000488543 FLVCR1Q9Y5Y0 555 aa10.71□□□□□ -0.69
HDAC6-230ENST00000488543 TRAV8-7A0A075B6U6 113 aa10.7□□□□□ -0.7
HDAC6-230ENST00000488543 TRAV17A0A0B4J275 112 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms