RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 OR8B12Q8NGG6 310 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 OR52I1Q8NGK6 324 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 RFKQ969G6 155 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 YIPF5Q969M3 257 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 PGAM5Q96HS1 289 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF649Q9BS31 505 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 C8orf4Q9NR00 106 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 FAM206AQ9NX38 181 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 DCAF16Q9NXF7 216 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 SLC22A13Q9Y226 551 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 EXOGQ9Y2C4 368 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 IGHV4-30-2A0A087WSY4 118 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 XPNPEP2O43895 674 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 CDC14BO60729 498 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 F12P00748 615 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 HLA-DPB1P04440 258 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 OR2T7P0C7T2 308 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 RAC2P15153 192 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 SELEP16581 610 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF81P51508 661 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 EFNA4P52798 201 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 ROM1Q03395 351 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 CLEC12BQ2HXU8 276 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 LHFPL3Q86UP9 236 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF679Q8IYX0 411 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 OR10AD1Q8NGE0 317 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 OR2T27Q8NH04 317 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 SGCDQ92629 289 aa14.59□□□□□ -0.07
SHROOM1-205ENST00000488072 H0YAE9 185 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 MLNRO43193 412 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 OR12D2P58182 307 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 SELENOVP59797 346 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 PSMA6P60900 246 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 TMED1Q13445 227 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 ODF4Q2M2E3 257 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 KCTD18Q6PI47 426 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 DNM1P46Q6ZS02 220 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 PGAP1Q75T13 922 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 MRPL21Q7Z2W9 205 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 YIPF7Q8N8F6 280 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 OR5L1Q8NGL2 311 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 ASB17Q8WXJ9 295 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 REEP6Q96HR9 211 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 SIGLEC11Q96RL6 698 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 REPIN1Q9BWE0 567 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 ISG20L2Q9H9L3 353 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 G6PC2Q9NQR9 355 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 ACOXLQ9NUZ1 547 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 GTF2A1LQ9UNN4 478 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 TMEM14AQ9Y6G1 99 aa14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 ZNF469Q96JG9 3925 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-205ENST00000488072 TMEM269A0A1B0GVZ9 245 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 CD300LBA8K4G0 201 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 RRP9O43818 475 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 MPZL2O60487 215 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 RIDAP52758 137 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 FAM3AP98173 230 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 HOXA4Q00056 320 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 POU4F2Q12837 409 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 MALLQ13021 153 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 DOC2BQ14184 412 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 DMRTC1Q5HYR2 192 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 LIPNQ5VXI9 398 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 UNQ6126/PRO20091Q6UXV3 157 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 C8orf59Q8N0T1 100 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 OR2Z1Q8NG97 314 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 OR56B2PQ8NGI1 322 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 FBLIM1Q8WUP2 373 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 SNX33Q8WV41 574 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 GGHQ92820 318 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 Q96MT0 163 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 MROQ9BYG7 248 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 PBOV1Q9GZY1 135 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 RAB1BQ9H0U4 201 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 CLEC2DQ9UHP7 191 aa14.57□□□□□ -0.08
SHROOM1-205ENST00000488072 hCG_38984A0A1B0GV85 526 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 DAPL1A0PJW8 107 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 GGT3PA6NGU5 568 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 METTL15A6NJ78 407 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 IQCF6A8MYZ5 107 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 F5H5P2 479 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 SMAD7O15105 426 aaKnown RBP14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 BMP4P12644 408 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 DAOP14920 347 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 ACKR3P25106 362 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 EGR3Q06889 387 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 TIGD6Q17RP2 521 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 SHEQ5VZ18 495 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 THAP5Q7Z6K1 395 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 PRSS35Q8N3Z0 413 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 OR8G5Q8NG78 346 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 RORBQ92753 470 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 SPSB4Q96A44 273 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 VCXQ9H320 206 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 MS4A5Q9H3V2 200 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 GNG8Q9UK08 70 aa14.56□□□□□ -0.08
SHROOM1-205ENST00000488072 RNF223E7ERA6 249 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 E9PI62 339 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 C3orf80F5H4A9 247 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms