RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 HAUS1Q96CS2 278 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 RNF145Q96MT1 663 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 COL21A1Q96P44 957 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 ZNF317Q96PQ6 595 aaPredicted RBP2.05□□□□□ -2.08
PTEN-204ENST00000487939 TMEM243Q9BU79 118 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 C20orf24Q9BUV8 137 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 ZNF586Q9NXT0 402 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 SLC39A1Q9NY26 324 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 SLC17A7Q9P2U7 560 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 ZNF391Q9UJN7 358 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 HPCAL4Q9UM19 191 aa2.05□□□□□ -2.08
PTEN-204ENST00000487939 CARHSP1Q9Y2V2 147 aaKnown RBP2.05□□□□□ -2.08
PTEN-204ENST00000487939 COL22A1Q8NFW1 1626 aaPredicted RBP2.05□□□□□ -2.08
PTEN-204ENST00000487939 C16orf90A8MZG2 172 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 H7C1H1 209 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 HUS1O60921 280 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 LSM8O95777 96 aaKnown RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 P0C880 135 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 IDH2P48735 452 aaKnown RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 CRISP1P54107 249 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 ZNF121P58317 390 aaPredicted RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 SRSF5Q13243 272 aaKnown RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 NID2Q14112 1375 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 DMC1Q14565 340 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 RTL4Q6ZR62 310 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 CENPQQ7L2Z9 268 aaPredicted RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 MDP1Q86V88 176 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 UBAC2Q8NBM4 344 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 GPR26Q8NDV2 337 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 C19orf18Q8NEA5 215 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 TGS1Q96RS0 853 aaKnown RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 SLIRPQ9GZT3 109 aaKnown RBP2.04□□□□□ -2.08
PTEN-204ENST00000487939 CSNK1G1Q9HCP0 422 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 SIGLEC7Q9Y286 467 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 SHANK1Q9Y566 2161 aa2.04□□□□□ -2.08
PTEN-204ENST00000487939 OR6C70A6NIJ9 312 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 KRT14P02533 472 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 ASGR1P07306 291 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 LIPEQ05469 1076 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 PRKCDQ05655 676 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 CARD17Q5XLA6 110 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 PRSS54Q6PEW0 395 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 SPESP1Q6UW49 350 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 CBLN2Q8IUK8 224 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 TTC29Q8NA56 475 aaPredicted RBP2.03□□□□□ -2.08
PTEN-204ENST00000487939 OR9G4Q8NGQ1 327 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 XPO6Q96QU8 1125 aaKnown RBP2.03□□□□□ -2.08
PTEN-204ENST00000487939 ZYG11BQ9C0D3 744 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 ACTR3CQ9C0K3 210 aaPredicted RBP2.03□□□□□ -2.08
PTEN-204ENST00000487939 TMEM38AQ9H6F2 299 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 MRM3Q9HC36 420 aaKnown RBP2.03□□□□□ -2.08
PTEN-204ENST00000487939 RETNQ9HD89 108 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 HES2Q9Y543 173 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 SEC16AO15027 2179 aa2.03□□□□□ -2.08
PTEN-204ENST00000487939 CEACAM18A8MTB9 384 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 EIF3HO15372 352 aaKnown RBP eCLIP2.02□□□□□ -2.09
PTEN-204ENST00000487939 RAD1O60671 282 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 HBE1P02100 147 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 MT-ND4P03905 459 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 HSPD1P10809 573 aaKnown RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 CSNK2A2P19784 350 aaPredicted RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 MYL9P24844 172 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 GTF2E2P29084 291 aaKnown RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 PFN2P35080 140 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 PCK1P35558 622 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 SYKP43405 635 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 RGS8P57771 180 aaPredicted RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 HMGN5P82970 282 aaKnown RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 SLC25A35Q3KQZ1 300 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 PRAMEF20Q5VT98 475 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 MED27Q6P2C8 311 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 CDH26Q8IXH8 852 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 ZNF664Q8N3J9 261 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 SHANK2-AS3Q9BTD1 123 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 ANGPTL4Q9BY76 406 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 DHX35Q9H5Z1 703 aaKnown RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 ANKRA2Q9H9E1 313 aa2.02□□□□□ -2.09
PTEN-204ENST00000487939 LYARQ9NX58 379 aaKnown RBP2.02□□□□□ -2.09
PTEN-204ENST00000487939 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
PTEN-204ENST00000487939 PCDH11XQ9BZA7 1347 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 MFNGO00587 321 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 SERPINB7O75635 380 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 RPN2P04844 631 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 GLAP06280 429 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 RAB4AP20338 218 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 NTF3P20783 257 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 BCKDHBP21953 392 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 GALR1P47211 349 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 C21orf59P57076 290 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 IFITM3Q01628 133 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 HSDL1Q3SXM5 330 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 KLHL12Q53G59 568 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 DEGS2Q6QHC5 323 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 CD300LGQ6UXG3 332 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 TMPRSS11AQ6ZMR5 421 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 ZNF645Q8N7E2 425 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 BPIFCQ8NFQ6 507 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 OR1L1Q8NH94 360 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 C8orf44Q96CB5 159 aa2.01□□□□□ -2.09
PTEN-204ENST00000487939 ZFP3Q96NJ6 502 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms