RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 COMMD3-BMI1R4GMX3 469 aa1.45□□□□□ -2.18
CCDC66-221ENST00000487739 C2orf16Q68DN1 1984 aa1.45□□□□□ -2.18
CCDC66-221ENST00000487739 THADAQ6YHU6 1953 aa1.45□□□□□ -2.18
CCDC66-221ENST00000487739 PCNX2A6NKB5 2137 aa1.45□□□□□ -2.18
CCDC66-221ENST00000487739 LOXHD1Q8IVV2 1947 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 COL22A1Q8NFW1 1626 aaPredicted RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 UBN2Q6ZU65 1347 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 IGHV3-72A0A0B4J1Y9 119 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 IGHV1-69DA0A0B4J2H0 117 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 IGHV7-4-1A0A0J9YVY3 117 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 CENPVL3A0A0U1RRI6 287 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 OR5H1A6NKK0 313 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 GABRPO00591 440 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 SERPINB7O75635 380 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 OR2F2O95006 317 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 CCNB2O95067 398 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 LSM8O95777 96 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 TALDO1P37837 337 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 C21orf59P57076 290 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 RGS8P57771 180 aaPredicted RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 UBE2MP61081 183 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 RPS15P62841 145 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 FLI1Q01543 452 aaPredicted RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 PGGHGQ32M88 737 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 GCSAMLQ5JQS6 135 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 TTC23LQ6PF05 361 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 TMEM220Q6QAJ8 160 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 TMEM105Q8N8V8 129 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 OR6Q1Q8NGQ2 317 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 NRGNQ92686 78 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 TGS1Q96RS0 853 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 LZTS2Q9BRK4 669 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 UQCC2Q9BRT2 126 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 TMEM243Q9BU79 118 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 UCK2Q9BZX2 261 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 SLC7A5P2Q9GIP4 190 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 DHX35Q9H5Z1 703 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 MRM3Q9HC36 420 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 EXOSC4Q9NPD3 245 aaKnown RBP1.44□□□□□ -2.18
CCDC66-221ENST00000487739 MED4Q9NPJ6 270 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 SLC39A1Q9NY26 324 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 C21orf62Q9NYP8 219 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 GCNT4Q9P109 453 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 RABL2BQ9UNT1 228 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 CBY1Q9Y3M2 126 aa1.44□□□□□ -2.18
CCDC66-221ENST00000487739 KIAA1671Q9BY89 1806 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 FHOD3Q2V2M9 1422 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 IGKV1-27A0A075B6S5 117 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CTAGE15A4D2H0 777 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CCDC169A6NNP5 214 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 BTNL10A8MVZ5 291 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 EIF1BO60739 113 aaKnown RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CDH16O75309 829 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 OXTP01178 125 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 IGHV3-11P01762 117 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CLTAP09496 248 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CD99P14209 185 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CTRB1P17538 263 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 USF1P22415 310 aaPredicted RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 OTX1P32242 354 aaPredicted RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 TGFBR1P36897 503 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 EIF1P41567 113 aaKnown RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 SYKP43405 635 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 MRPL19P49406 292 aaKnown RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 PRLHRP49683 370 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ZNF121P58317 390 aaPredicted RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 BEX3Q00994 111 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 SIGLEC14Q08ET2 396 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ILKQ13418 452 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ART3Q13508 389 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 RCN1Q15293 331 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 HSDL1Q3SXM5 330 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 TEX30Q5JUR7 227 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 GUSBP11Q6P575 273 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CTAGE6Q86UF2 777 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ZNF101Q8IZC7 436 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 TTC29Q8NA56 475 aaPredicted RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ST20-AS1Q8NBB2 130 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 OR5T1Q8NG75 326 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 C18orf15Q96N68 181 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 XPO6Q96QU8 1125 aaKnown RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 CHP1Q99653 195 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ZYG11BQ9C0D3 744 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 GEMIN7Q9H840 131 aaKnown RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 RHBDL2Q9NX52 303 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 LYARQ9NX58 379 aaKnown RBP1.43□□□□□ -2.18
CCDC66-221ENST00000487739 LTBP4Q8N2S1 1624 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 ZNF407Q9C0G0 2248 aa1.43□□□□□ -2.18
CCDC66-221ENST00000487739 TRAV6A0A075B6T7 132 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 IGHV3-49A0A0A0MS15 119 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 TMEM120BA0PK00 339 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 PDZK1P1A8MUH7 402 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 NME4O00746 187 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 DNALI1O14645 258 aaPredicted RBP1.42□□□□□ -2.18
CCDC66-221ENST00000487739 CYB5R3P00387 301 aaPredicted RBP1.42□□□□□ -2.18
CCDC66-221ENST00000487739 PAHP00439 452 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 HPRT1P00492 218 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 AGTP01019 485 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 KRT14P02533 472 aa1.42□□□□□ -2.18
CCDC66-221ENST00000487739 GLAP06280 429 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms