RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 TOMM34Q15785 309 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SSX9Q7RTT3 188 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 BATF2Q8N1L9 274 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 OR8B4Q96RC9 309 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 A0A1W2PPC4 97 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 BCL2L11O43521 198 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 PRKNO60260 465 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 LRP3O75074 770 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 MGST1P10620 155 aaKnown RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 FOSL1P15407 271 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 CRYBB2P43320 205 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SMAD4Q13485 552 aaKnown RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 FBXW5Q969U6 566 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SUCNR1Q9BXA5 334 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF891A8MT65 544 aaPredicted RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 DCTN6O00399 190 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 RAB1AP62820 205 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 GLDNQ6ZMI3 551 aaPredicted RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 IL34Q6ZMJ4 242 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 KMT5CQ86Y97 462 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 C11orf40Q8WZ69 217 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 TTC9Q92623 222 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 GDF2Q9UK05 429 aaPredicted RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 ARAP2Q8WZ64 1704 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 LRRC30A6NM36 301 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 WDR1O75083 606 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 FZD2Q14332 565 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 AANATQ16613 207 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 HAGHQ16775 308 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 RPUSD3Q6P087 351 aaKnown RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF705AQ6ZN79 300 aaPredicted RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 USB1Q9BQ65 265 aaKnown RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 A0A0B4J2E0 115 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 A0A1B0GX12 115 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 ARR3P36575 388 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 P2RX3P56373 397 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 CLN3Q13286 438 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 OR8G1Q15617 311 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 PNLIPRP3Q17RR3 467 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 FAM219BQ5XKK7 198 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF573Q86YE8 665 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 SKA3Q8IX90 412 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 ZBTB44Q8NCP5 570 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 OTOSQ8NHW6 89 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 C2CD4CQ8TF44 421 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 RDH5Q92781 318 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 HDGFL3Q9Y3E1 203 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 TGOLN2O43493 480 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 SLC16A12Q6ZSM3 486 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 OR5AS1Q8N127 324 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 ARRDC1Q8N5I2 433 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 RTN4IP1Q8WWV3 396 aaPredicted RBP13.29□□□□□ -0.28
EPHB4-206ENST00000487222 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
EPHB4-206ENST00000487222 SH2D1BO14796 132 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 DHHO43323 396 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 ATF1P18846 271 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 C6orf15Q6UXA7 325 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-206ENST00000487222 LURAP1Q96LR2 239 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 SHARPINQ9H0F6 387 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 PYCARD-AS1I3L0S3 204 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 NKX2-2O95096 273 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-206ENST00000487222 BAMBIQ13145 260 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 CLLU1Q5K131 121 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 GPR32P1Q8NGA4 272 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 OR5M8Q8NGP6 311 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 RIMS4Q9H426 269 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-206ENST00000487222 FN3KRPQ9HA64 309 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF727A8MUV8 499 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 SERPINE3A8MV23 424 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 PLPP2O43688 288 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 LIMS3P0CW19 117 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 LIMS4P0CW20 117 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 SLC25A1P53007 311 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 GFERP55789 205 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 RAG2P55895 527 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 TMEM128Q5BJH2 165 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 LSRQ86X29 649 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF485Q8NCK3 441 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 H1FXQ92522 213 aaKnown RBP13.28□□□□□ -0.28
EPHB4-206ENST00000487222 FGF14Q92915 247 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 LHX4Q969G2 390 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 REEP6Q96HR9 211 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 SSSCA1O60232 199 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 HMGCLL1Q8TB92 370 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 KCNE4Q8WWG9 221 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 WDR34Q96EX3 536 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 DECR2Q9NUI1 292 aa13.28□□□□□ -0.28
EPHB4-206ENST00000487222 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms