RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SPATS1Q496A3 300 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 RPL13AP3Q6NVV1 102 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 BTNL3Q6UXE8 466 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 RASSF6Q6ZTQ3 369 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 DCXRQ7Z4W1 244 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 OR8B3Q8NGG8 313 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 OR2T4Q8NH00 348 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 PLEKHA8Q96JA3 519 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 OR8B2Q96RD0 313 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 TRIM15Q9C019 465 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 MS4A7Q9GZW8 240 aaPredicted RBP20.5■□□□□ 0.87
LIME1-206ENST00000487026 ACTR3BQ9P1U1 418 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 N6AMT1Q9Y5N5 214 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 CD300LBA8K4G0 201 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 GYPBP06028 91 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 EGR1P18146 543 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 PRTN3P24158 256 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 PITPNBP48739 271 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 RAD23AP54725 363 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 LRRN1Q6UXK5 716 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 PARP8Q8N3A8 854 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 LINC00471Q8N535 108 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 CELF2-AS1Q8N7Q2 184 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 ZNF511Q8NB15 262 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 AQP11Q8NBQ7 271 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 OR11L1Q8NGX0 322 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 Q8TCH9 128 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 TSSK6Q9BXA6 273 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 TBC1D23Q9NUY8 699 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 VNN3Q9NY84 501 aa20.49■□□□□ 0.87
LIME1-206ENST00000487026 TCRBV5S2A0A599 114 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 GGT3PA6NGU5 568 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 B2RBV5 119 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 SPARCP09486 303 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 SLC2A1P11166 492 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 CPT2P23786 658 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 MAGEA2P43356 314 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 PRKXP51817 358 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 CRMP1Q14194 572 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 GLYATL3Q5SZD4 288 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 NLRC3Q7RTR2 1065 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 BOLLQ8N9W6 283 aaKnown RBP20.48■□□□□ 0.87
LIME1-206ENST00000487026 OR4Q3Q8NH05 313 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 DACT3Q96B18 629 aaPredicted RBP20.48■□□□□ 0.87
LIME1-206ENST00000487026 CENPMQ9NSP4 180 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 CLN8Q9UBY8 286 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 PCDHGB1Q9Y5G3 927 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 COMMD3-BMI1R4GMX3 469 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 U3KQV3 271 aa20.48■□□□□ 0.87
LIME1-206ENST00000487026 DOCK11Q5JSL3 2073 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 KIR2DS1A0A191URI9 304 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 DYNC1I1O14576 645 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 SOX14O95416 240 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 FSTL3O95633 263 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 HKR1P10072 659 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 CLUP10909 449 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 OTX1P32242 354 aaPredicted RBP20.47■□□□□ 0.87
LIME1-206ENST00000487026 SFRP4Q6FHJ7 346 aaPredicted RBP20.47■□□□□ 0.87
LIME1-206ENST00000487026 SPATC1Q76KD6 591 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 LNX2Q8N448 690 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 ERGIC1Q969X5 290 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 NUDT16L1Q9BRJ7 211 aaKnown RBP20.47■□□□□ 0.87
LIME1-206ENST00000487026 COPS4Q9BT78 406 aa20.47■□□□□ 0.87
LIME1-206ENST00000487026 ADAT1Q9BUB4 502 aaKnown RBP20.47■□□□□ 0.87
LIME1-206ENST00000487026 ZNF593O00488 134 aaPredicted RBP20.46■□□□□ 0.87
LIME1-206ENST00000487026 FMO3P31513 532 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 TAF13Q15543 124 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 WDR25Q64LD2 544 aaPredicted RBP20.46■□□□□ 0.87
LIME1-206ENST00000487026 DRAM2Q6UX65 266 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 ZNF841Q6ZN19 808 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 DCDC5Q6ZRR9 648 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 FITM2Q8N6M3 262 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 TAF15Q92804 592 aaKnown RBP eCLIP20.46■□□□□ 0.87
LIME1-206ENST00000487026 UPRTQ96BW1 309 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 SLAMF6Q96DU3 332 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 ZMYND19Q96E35 227 aaPredicted RBP20.46■□□□□ 0.87
LIME1-206ENST00000487026 ARMC1Q9NVT9 282 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 RNF7Q9UBF6 113 aa20.46■□□□□ 0.87
LIME1-206ENST00000487026 TRAV40A0A0B4J280 105 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 SPRY1O43609 319 aaPredicted RBP20.45■□□□□ 0.86
LIME1-206ENST00000487026 GMDSO60547 372 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 PPIAL4GP0DN37 164 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 SPI1P17947 270 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 ENTPD1P49961 510 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 MNAT1P51948 309 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 MS4A2Q01362 244 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 DHFR2Q86XF0 187 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 NMNAT2Q9BZQ4 307 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 SLC22A4Q9H015 551 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 FN3KRPQ9HA64 309 aa20.45■□□□□ 0.86
LIME1-206ENST00000487026 C3orf80F5H4A9 247 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 PSMB10P40306 273 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 FOXL1Q12952 345 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 SLC9A3R2Q15599 337 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 MICAQ29983 383 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 OR6K6Q8NGW6 343 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 SGMS2Q8NHU3 365 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 NSL1Q96IY1 281 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 KCNJ15Q99712 375 aa20.44■□□□□ 0.86
LIME1-206ENST00000487026 MMADHCQ9H3L0 296 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms