RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CLDN6P56747 220 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF616Q08AN1 781 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 SMCO1Q147U7 214 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 MPPED2Q15777 294 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 OR51E1Q8TCB6 317 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 GLYATL2Q8WU03 294 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 IP6K3Q96PC2 410 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 A0A1W2PQF6 199 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 ADAM10O14672 748 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF217O75362 1048 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 IL12BP29460 328 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 RFC3P40938 356 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 SLC25A1P53007 311 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 POU3F1Q03052 451 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 TMEM240Q5SV17 173 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF704Q6ZNC4 412 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 PAQR4Q8N4S7 273 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 RPS4Y2Q8TD47 263 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 RNF128Q8TEB7 428 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 LSM5Q9Y4Y9 91 aaKnown RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 METTL21EPA6NDL7 271 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 H2BFMP0C1H6 154 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 VSIG8P0DPA2 414 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 NQO2P16083 231 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 NTSR1P30989 418 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 KIR2DL1P43626 348 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 CTAG1AP78358 180 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 MICBQ29980 383 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 NAA40Q86UY6 237 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 SCARF2Q96GP6 870 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 FAM86C1Q9NVL1 165 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
HSPG2-211ENST00000486901 PCDHGA1Q9Y5H4 931 aa11.05□□□□□ -0.64
HSPG2-211ENST00000486901 TTLL8A6PVC2 850 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 ATXN7O15265 892 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-211ENST00000486901 CD8AP01732 235 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 OR8U9P0C7N5 309 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 PNMTP11086 282 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 HOXA1P49639 335 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-211ENST00000486901 FBXW4P57775 412 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 FOXK1P85037 733 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 EGR3Q06889 387 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SHHQ15465 462 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 PRTGQ2VWP7 1150 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SLC25A42Q86VD7 318 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SLC22A18ASQ8N1D0 253 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 OR8U1Q8NH10 309 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 JSRP1Q96MG2 331 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-211ENST00000486901 MRI1Q9BV20 369 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 C1orf198Q9H425 327 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 ZFP57Q9NU63 452 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 CLDN16Q9Y5I7 305 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 FAM221BA6H8Z2 402 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 TNFSF14O43557 240 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SYT7O43581 403 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 GNRH1P01148 92 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 OR3A4PP47883 348 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 ANKRD55Q3KP44 614 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SP6Q3SY56 376 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 FAM76BQ5HYJ3 339 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 KCTD18Q6PI47 426 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-211ENST00000486901 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF701Q9NV72 531 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-211ENST00000486901 SHANK1Q9Y566 2161 aa11.04□□□□□ -0.64
HSPG2-211ENST00000486901 NDUFS6O75380 124 aaKnown RBP11.03□□□□□ -0.64
HSPG2-211ENST00000486901 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-211ENST00000486901 RPL27P61353 136 aaKnown RBP11.03□□□□□ -0.64
HSPG2-211ENST00000486901 DNM1P46Q6ZS02 220 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 MRGPRX1Q96LB2 322 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 PRRT1Q99946 306 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 CYP8B1Q9UNU6 501 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 A6NCN8 305 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 TNFSF12O43508 249 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 CRTAPO75718 401 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-211ENST00000486901 CD1AP06126 327 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 HCKP08631 526 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 ARL4DP49703 201 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 GLIPR1L1Q6UWM5 242 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 CLEC18BQ6UXF7 455 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 TMEM92Q6UXU6 159 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 C19orf47Q8N9M1 422 aaKnown RBP11.03□□□□□ -0.64
HSPG2-211ENST00000486901 APCDD1LQ8NCL9 501 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 CD300LFQ8TDQ1 290 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 SLC25A43Q8WUT9 341 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-211ENST00000486901 REEP6Q96HR9 211 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 ARPC4-TTLL3A0A0A6YYG9 625 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 C5orf63A6NC05 138 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 ZNHIT1O43257 154 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 XRCC2O43543 280 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 SSX5O60225 188 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 SNAPINO95295 136 aa11.03□□□□□ -0.64
HSPG2-211ENST00000486901 JMJD7P0C870 316 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms