RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TBCEQ15813 527 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-229ENST00000486665 FDX2Q6P4F2 183 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 RFPL4BQ6ZWI9 263 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 CATSPERDQ86XM0 798 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-229ENST00000486665 SVOPQ8N4V2 548 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ZFP41Q8N8Y5 198 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 OR2G2Q8NGZ5 317 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 SGK3Q96BR1 496 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 PIK3IP1Q96FE7 263 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 PGAM5Q96HS1 289 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 RADILQ96JH8 1075 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 PBOV1Q9GZY1 135 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ESRP2Q9H6T0 727 aaKnown RBP11.01□□□□□ -0.65
HDAC6-229ENST00000486665 TBCCD1Q9NVR7 557 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 FRRS1LQ9P0K9 344 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 EIF3KQ9UBQ5 218 aaKnown RBP11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ST6GALNAC2Q9UJ37 374 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 RTTNQ86VV8 2226 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 DNHD1Q96M86 4753 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ACOD1A6NK06 481 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 SHISA9B4DS77 424 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 LOC110117498-PIK3R3F6TDL0 507 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 OGG1O15527 345 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 ICMTO60725 284 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 SMPD2O60906 423 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 INMTO95050 263 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 APOC1P02654 83 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 CD3EP07766 207 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 NR4A1P22736 598 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 PCSK6P29122 969 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 TGM4P49221 684 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 ERVS71-1P61550 626 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 ALKBH1Q13686 389 aaKnown RBP11□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF829Q3KNS6 432 aaPredicted RBP11□□□□□ -0.65
HDAC6-229ENST00000486665 WDR38Q5JTN6 314 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 UBE2UQ5VVX9 321 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 ADAM5Q6NVV9 412 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 OR8B12Q8NGG6 310 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 ABHD4Q8TB40 342 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 NEUROG1Q92886 237 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 KCNS3Q9BQ31 491 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 TMEM204Q9BSN7 226 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 SOX7Q9BT81 388 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 GTF2A1LQ9UNN4 478 aa11□□□□□ -0.65
HDAC6-229ENST00000486665 ABCA4P78363 2273 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 OR4C45A6NMZ5 311 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 TBX1O43435 398 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 GPRIN2O60269 458 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 TTRP02766 147 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 HSMCR30P0CW71 290 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 THBS4P35443 961 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 RGS6P49758 472 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 NKX6-1P78426 367 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-229ENST00000486665 ACSM1Q08AH1 577 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 NEDD8Q15843 81 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 ODF4Q2M2E3 257 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 GLYATL3Q5SZD4 288 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 SPATA46Q5T0L3 261 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 BCL2L15Q5TBC7 163 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 RPL22L1Q6P5R6 122 aaKnown RBP10.99□□□□□ -0.65
HDAC6-229ENST00000486665 ARL9Q6T311 187 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 SLC22A25Q6T423 547 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF367Q7RTV3 350 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 ELMOD2Q8IZ81 293 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 RDH10Q8IZV5 341 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 KBTBD8Q8NFY9 601 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 OR1J1Q8NGS3 322 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 OR2AE1Q8NHA4 323 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 LILRB1Q8NHL6 650 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-229ENST00000486665 RPS4Y2Q8TD47 263 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-229ENST00000486665 LYZL4Q96KX0 146 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 COG8Q96MW5 612 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 OPALINQ96PE5 141 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 MGLLQ99685 303 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 PTTG3PQ9NZH4 202 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 KCNN3Q9UGI6 736 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 NUFIP1Q9UHK0 495 aaKnown RBP10.99□□□□□ -0.65
HDAC6-229ENST00000486665 ATP23Q9Y6H3 246 aa10.99□□□□□ -0.65
HDAC6-229ENST00000486665 TRBV2A0A0J9YWF9 115 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 A0A1B0GTI1 187 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 PNMA8CA0A1B0GUJ8 204 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 A0A1W2PPR1 153 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 A6NNC1 897 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 E7EQL1 145 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 P2RY10O00398 339 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 CD99P14209 185 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 JUNBP17275 347 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 RAD52P43351 418 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 CCR9P51686 369 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 NR1H2P55055 460 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 PRSS12P56730 875 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 PPP1CBP62140 327 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF92Q03936 586 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 SLC3A1Q07837 685 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 MRPL28Q13084 256 aaKnown RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 SNTB2Q13425 540 aaKnown RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 HLXQ14774 488 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms