RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ANXA2P07355 339 aaKnown RBP10.88□□□□□ -0.67
CHMP3-208ENST00000486404 SLC2A1P11166 492 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 IRF2P14316 349 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 MDH2P40926 338 aaKnown RBP10.88□□□□□ -0.67
CHMP3-208ENST00000486404 CX3CR1P49238 355 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 SNAI3Q3KNW1 292 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 DCAF12L2Q5VW00 463 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 PLBD1Q6P4A8 553 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 SHFQ7M4L6 423 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 DPY19L4Q7Z388 723 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 MOGAT3Q86VF5 341 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 OR2AE1Q8NHA4 323 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 KCNJ15Q99712 375 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
CHMP3-208ENST00000486404 PRRG3Q9BZD7 231 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 OPA3Q9H6K4 179 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 SP140LQ9H930 580 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 GCM1Q9NP62 436 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 DCAF16Q9NXF7 216 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 COL6A5A8TX70 2615 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 H0YL77 283 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 MLNRO43193 412 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 PRODHO43272 600 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 XRCC2O43543 280 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 APOC1P02654 83 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 HLA-DPB1P04440 258 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 PRKACGP22612 351 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 THBS2P35442 1172 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 LCN2P80188 198 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 HNRNPA0Q13151 305 aaKnown RBP10.87□□□□□ -0.67
CHMP3-208ENST00000486404 ZMYND11Q15326 602 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 OR8G1Q15617 311 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 PCK2Q16822 640 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 TIGD6Q17RP2 521 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 RSPO1Q2MKA7 263 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-208ENST00000486404 TMEM155Q4W5P6 130 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 TEX30Q5JUR7 227 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 GLYATL3Q5SZD4 288 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 NAA40Q86UY6 237 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 C1orf87Q8N0U7 546 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 PAPD5Q8NDF8 572 aaKnown RBP10.87□□□□□ -0.67
CHMP3-208ENST00000486404 OR11L1Q8NGX0 322 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 ZNF420Q8TAQ5 688 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-208ENST00000486404 ZMYND19Q96E35 227 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-208ENST00000486404 NRBF2Q96F24 287 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 SLC22A4Q9H015 551 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 TOR3AQ9H497 397 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 METTL17Q9H7H0 456 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-208ENST00000486404 DNAJC27Q9NZQ0 273 aa10.87□□□□□ -0.67
CHMP3-208ENST00000486404 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-208ENST00000486404 CD300LBA8K4G0 201 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 J3QLI3 93 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 GPR37O15354 613 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 FOXH1O75593 365 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 CYB5R3P00387 301 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-208ENST00000486404 OTX1P32242 354 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-208ENST00000486404 NAA10P41227 235 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-208ENST00000486404 ZNF92Q03936 586 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 GFOD2Q3B7J2 385 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 LINC01590Q5TEZ4 76 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 LCN1P1Q5VSP4 162 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-208ENST00000486404 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 ABHD6Q9BV23 337 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-208ENST00000486404 SLC25A19Q9HC21 320 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 KRT84Q9NSB2 600 aa10.86□□□□□ -0.67
CHMP3-208ENST00000486404 CUBNO60494 3623 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 TCF21O43680 179 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 SELENOFO60613 162 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 LYNP07948 512 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 H2BFMP0C1H6 154 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 FCGR1AP12314 374 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
CHMP3-208ENST00000486404 CA6P23280 308 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 GATA3P23771 443 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 MZT1Q08AG7 82 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 ATP6AP1Q15904 470 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 SNAPC1Q16533 368 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 ESCO2Q56NI9 601 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 LIPNQ5VXI9 398 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 NLRC3Q7RTR2 1065 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 CPOQ8IVL8 374 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 RFLNBQ8N5W9 214 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 CELF2-AS1Q8N7Q2 184 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 OR56B2PQ8NGI1 322 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 OR5K1Q8NHB7 308 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 RNF133Q8WVZ7 376 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 ZDHHC16Q969W1 377 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 OR10A2Q9H208 303 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 MARCH7Q9H992 704 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 BRD7Q9NPI1 651 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 G6PC2Q9NQR9 355 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 TVP23BQ9NYZ1 205 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
CHMP3-208ENST00000486404 OR5V1Q9UGF6 321 aa10.85□□□□□ -0.67
CHMP3-208ENST00000486404 ENOPH1Q9UHY7 261 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms