RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SGCEO43556 437 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 SYNGR3O43761 229 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 MTRF1O75570 445 aaKnown RBP10.51□□□□□ -0.73
PKP4-213ENST00000486254 RBBP9O75884 186 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 LPLP06858 475 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 MELTFP08582 738 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 PRF1P14222 555 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 PSMB1P20618 241 aaKnown RBP10.51□□□□□ -0.73
PKP4-213ENST00000486254 GIFP27352 417 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 PRKXP51817 358 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 QRFPP83859 136 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 SPOCK1Q08629 439 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 TCF15Q12870 199 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 RNPS1Q15287 305 aaKnown RBP10.51□□□□□ -0.73
PKP4-213ENST00000486254 OR5AS1Q8N127 324 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 OR14K1Q8NGZ2 314 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 ZNF799Q96GE5 643 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 MED30Q96HR3 178 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 FOXB1Q99853 325 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 EXO5Q9H790 373 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
PKP4-213ENST00000486254 EP300Q09472 2414 aaPredicted RBP10.5□□□□□ -0.73
PKP4-213ENST00000486254 DCDC2BA2VCK2 349 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 PEX14O75381 377 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 SYNGR4O95473 234 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 TMIGD3P0DMS9 266 aaPredicted RBP10.5□□□□□ -0.73
PKP4-213ENST00000486254 NTF4P34130 210 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 PRSS3P35030 304 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 GNALP38405 381 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 STARP49675 285 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 MEOX1P50221 254 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 EFNB2P52799 333 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 CARTPTQ16568 116 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 CD276Q5ZPR3 534 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 IGFL2Q6UWQ7 119 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 FAM57BQ71RH2 274 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 DTX3Q8N9I9 347 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 OR4D6Q8NGJ1 314 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 UBASH3BQ8TF42 649 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 FBXO17Q96EF6 278 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 PGAM5Q96HS1 289 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 CHST5Q9GZS9 411 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 OR10A2Q9H208 303 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 CNTD2Q9H8S5 307 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 ZDHHC11Q9H8X9 412 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 GPR35Q9HC97 309 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 NEK6Q9HC98 313 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 ING3Q9NXR8 418 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 ZNF319Q9P2F9 582 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 KLK11Q9UBX7 282 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 ITGB1BP2Q9UKP3 347 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 TIMM10BQ9Y5J6 103 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 PTPRBP23467 1997 aa10.5□□□□□ -0.73
PKP4-213ENST00000486254 A0A1B0GUH1 482 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 TMEM14DPA8MWL7 114 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 H3BSH0 61 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 FARS2O95363 451 aaKnown RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 TGM6O95932 706 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 H2AFB2P0C5Z0 115 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 CEACAM1P13688 526 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 CPN1P15169 458 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 ZNF93P35789 620 aaPredicted RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 MAGEA5P43359 124 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 PLGLB1Q02325 96 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 CBX3Q13185 183 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 RSPO1Q2MKA7 263 aaPredicted RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 LINC00696Q6ZRV3 163 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 GALNTL5Q7Z4T8 443 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 BIVMQ86UB2 503 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 GLCCI1Q86VQ1 547 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 ZNF100Q8IYN0 542 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 OR52N4Q8NGI2 321 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 OR13C9Q8NGT0 318 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 ROBO4Q8WZ75 1007 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 CPNE2Q96FN4 548 aaPredicted RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 PTTG3PQ9NZH4 202 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 PAIP2BQ9ULR5 123 aaKnown RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 NOSIPQ9Y314 301 aaKnown RBP10.49□□□□□ -0.73
PKP4-213ENST00000486254 ZNF175Q9Y473 711 aa10.49□□□□□ -0.73
PKP4-213ENST00000486254 TRAV18A0A075B6X5 111 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 LMX1BO60663 402 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 KDM4BO94953 1096 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 MT-ND4P03905 459 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 CHRM2P08172 466 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 COX5BP10606 129 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 STOMP27105 288 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 PLA2G7Q13093 441 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 MAB21L1Q13394 359 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZMYND11Q15326 602 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 KCNJ8Q15842 424 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 GSG1Q2KHT4 349 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 CEACAM16Q2WEN9 425 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 TMPRSS7Q7RTY8 843 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 DPPA2Q7Z7J5 298 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms