RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF250P15622 560 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 SELEP16581 610 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 ZNF19P17023 458 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 CFL1P23528 166 aaKnown RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 EVX1P49640 407 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 SNAI3Q3KNW1 292 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 CDONQ4KMG0 1287 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 ZMAT1Q5H9K5 638 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 RBM48Q5RL73 367 aaKnown RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 BCL2L15Q5TBC7 163 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 MBNL2Q5VZF2 373 aaKnown RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 COLCA1Q6ZS62 124 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 PGAP1Q75T13 922 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 KLHL36Q8N4N3 616 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 CMBLQ96DG6 245 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 TRMT61AQ96FX7 289 aaKnown RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 C4orf36Q96KX1 117 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 TRAF4Q9BUZ4 470 aaPredicted RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 JAM3Q9BX67 310 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 LIME1Q9H400 295 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 RGCCQ9H4X1 137 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 ACOXLQ9NUZ1 547 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 TAAR3PQ9P1P4 343 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 PSORS1C1Q9UIG5 152 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 SNX5Q9Y5X3 404 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 R4GMQ9 66 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 ASH1LQ9NR48 2969 aaKnown RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 DCHS2Q6V1P9 2916 aa9.77□□□□□ -0.84
NUP50-216ENST00000486184 GGT3PA6NGU5 568 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 CLPTM1O96005 669 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 IGHV3-13P01766 116 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 HTR1AP08908 422 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 CCDC159P0C7I6 412 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 EEF1B2P24534 225 aaKnown RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 LIPAP38571 399 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 MPV17P39210 176 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 MMP16P51512 607 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 MRPL28Q13084 256 aaKnown RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 GK2Q14410 553 aaPredicted RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 HLXQ14774 488 aaPredicted RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 ALKBH6Q3KRA9 238 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 GLYATL3Q5SZD4 288 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 LIPNQ5VXI9 398 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 LAIR2Q6ISS4 152 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 FBXW12Q6X9E4 464 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 LRP11Q86VZ4 500 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 SYS1Q8N2H4 156 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 OR2AE1Q8NHA4 323 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 HAVCR2Q8TDQ0 301 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 SPRYD4Q8WW59 207 aaPredicted RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 NINJ1Q92982 152 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 REEP6Q96HR9 211 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 VRK1Q99986 396 aaPredicted RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 RHNO1Q9BSD3 238 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 CACNG6Q9BXT2 260 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 PBOV1Q9GZY1 135 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 MS4A5Q9H3V2 200 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 POFUT1Q9H488 388 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 CYSLTR2Q9NS75 346 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 FAM206AQ9NX38 181 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 CGGBP1Q9UFW8 167 aaPredicted RBP9.77□□□□□ -0.85
NUP50-216ENST00000486184 ZNF391Q9UJN7 358 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 OR52A1Q9UKL2 312 aa9.77□□□□□ -0.85
NUP50-216ENST00000486184 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 ARFGEF3Q5TH69 2177 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 IGLV3-9A0A075B6K5 115 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 RGS10O43665 173 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 CD53P19397 219 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 CDKN1AP38936 164 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 PSMB10P40306 273 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 ALDH3B1P43353 468 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 PPOXP50336 477 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 ETV1P50549 477 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 GBX2P52951 348 aaPredicted RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 OR12D2P58182 307 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 MFGE8Q08431 387 aaPredicted RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 PSG7Q13046 419 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 MSMPQ1L6U9 139 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 SWI5Q1ZZU3 235 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 ZNF684Q5T5D7 378 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 OR2T2Q6IF00 324 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 EGFL6Q8IUX8 553 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 OR8B12Q8NGG6 310 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 HAVCR1Q96D42 359 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 CCDC90BQ9GZT6 254 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 RAB1BQ9H0U4 201 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 BEX4Q9NWD9 120 aaPredicted RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 MYEF2Q9P2K5 600 aaKnown RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 NUFIP1Q9UHK0 495 aaKnown RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 PURGQ9UJV8 347 aaKnown RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 ERGIC3Q9Y282 383 aa9.76□□□□□ -0.85
NUP50-216ENST00000486184 CAB39Q9Y376 341 aaPredicted RBP9.76□□□□□ -0.85
NUP50-216ENST00000486184 LRBAP50851 2863 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 TPD52L2O43399 206 aaKnown RBP9.75□□□□□ -0.85
NUP50-216ENST00000486184 MTRF1O75570 445 aaKnown RBP9.75□□□□□ -0.85
NUP50-216ENST00000486184 CD8AP01732 235 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 CDK1P06493 297 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 ADRA2AP08913 450 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms