RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GGT3PA6NGU5 568 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 OVOL3O00110 214 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 DLGAP1O14490 977 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 TPD52L2O43399 206 aaKnown RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 TBX1O43435 398 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 GPRIN2O60269 458 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 NGFP01138 241 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 SOD3P08294 240 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 DBHP09172 617 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ATP6V1B1P15313 513 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF12P17014 697 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 GABRB1P18505 474 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 OTX1P32242 354 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 WNT5AP41221 380 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF81P51508 661 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 EFNA4P52798 201 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 AQP4P55087 323 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF121P58317 390 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 PSMA6P60900 246 aaKnown RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ISL1P61371 349 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF91Q05481 1191 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 CDK5R2Q13319 367 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 SWI5Q1ZZU3 235 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 C6orf52Q5T4I8 152 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 OTPQ5XKR4 325 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 LYPD4Q6UWN0 246 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 IZUMO2Q6UXV1 221 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 BCDIN3DQ7Z5W3 292 aaKnown RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 KLBQ86Z14 1044 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF101Q8IZC7 436 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 STX19Q8N4C7 294 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 SPERTQ8NA61 448 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF540Q8NDQ6 660 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 CSNK2A3Q8NEV1 391 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 SLC7A6Q92536 515 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 CMBLQ96DG6 245 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF184Q99676 751 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 SYT3Q9BQG1 590 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 CACNG6Q9BXT2 260 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 DLL4Q9NR61 685 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 TMEM100Q9NV29 134 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 NKIRAS2Q9NYR9 191 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 CNOT2Q9NZN8 540 aaKnown RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 EXOGQ9Y2C4 368 aaKnown RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 EXOSC1Q9Y3B2 195 aaKnown RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 TPRKBQ9Y3C4 175 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 IGLV3-9A0A075B6K5 115 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 A0A0U1RQV5 110 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 ANKRD30BLA7E2S9 258 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 LOC110117498-PIK3R3F6TDL0 507 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 IFNL4K9M1U5 179 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 FAM20BO75063 409 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 CD8AP01732 235 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 ADRA2AP08913 450 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 KITLGP21583 273 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 GNALP38405 381 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 PTH2RP49190 550 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 GBX2P52951 348 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 HCCSP53701 268 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 MRPS11P82912 194 aaKnown RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 PSG7Q13046 419 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 GALEQ14376 348 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 RSPO1Q2MKA7 263 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 SPATA46Q5T0L3 261 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 BCL2L15Q5TBC7 163 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 CLEC2AQ6UVW9 174 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 LRRN1Q6UXK5 716 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 RFPL4BQ6ZWI9 263 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 USP51Q70EK9 711 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 FAM57BQ71RH2 274 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 SYS1Q8N2H4 156 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 OR10S1Q8NGN2 331 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 NRG4Q8WWG1 115 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 LGALS12Q96DT0 336 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 PERPQ96FX8 193 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 TMEM80Q96HE8 168 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 HIST1H2AAQ96QV6 131 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 TBX5Q99593 518 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 RHNO1Q9BSD3 238 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 REPIN1Q9BWE0 567 aaKnown RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 ANKRD60Q9BZ19 345 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 MRPL37Q9BZE1 423 aaKnown RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 NEK6Q9HC98 313 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 AMBNQ9NP70 447 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 FGF20Q9NP95 211 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 PLCXD1Q9NUJ7 323 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 PTTG3PQ9NZH4 202 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 MRPL15Q9P015 296 aaKnown RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 PURGQ9UJV8 347 aaKnown RBP7.09□□□□□ -1.27
SF3A1-208ENST00000485618 GNG8Q9UK08 70 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 FZR1Q9UM11 496 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 GTF2A1LQ9UNN4 478 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 LRP12Q9Y561 859 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 R4GMQ9 66 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 ABCA2Q9BZC7 2435 aa7.09□□□□□ -1.27
SF3A1-208ENST00000485618 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.28
SF3A1-208ENST00000485618 USF3Q68DE3 2245 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms