RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 PIPOXQ9P0Z9 390 aa9.49□□□□□ -0.89
DDX56-212ENST00000485367 MGAT4CQ9UBM8 478 aa9.49□□□□□ -0.89
DDX56-212ENST00000485367 SIRT4Q9Y6E7 314 aaPredicted RBP9.49□□□□□ -0.89
DDX56-212ENST00000485367 DUXAA6NLW8 204 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 NPIPB9F8W1W9 429 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 TNFSF11O14788 317 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 CXCL13O43927 109 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 CREBL2O60519 120 aaPredicted RBP9.48□□□□□ -0.89
DDX56-212ENST00000485367 SYNGR4O95473 234 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 PLGP00747 810 aaPredicted RBP9.48□□□□□ -0.89
DDX56-212ENST00000485367 ALDOBP05062 364 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 CHRM4P08173 479 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 IL11P20809 199 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 EIF1P41567 113 aaKnown RBP9.48□□□□□ -0.89
DDX56-212ENST00000485367 MEOX2P50222 304 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 ARHGDIBP52566 201 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 OR10A3P58181 314 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■■■□□ 16.9
DDX56-212ENST00000485367 FAM27E3Q08E93 113 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 GPR68Q15743 365 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 ZNF626Q68DY1 528 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 DMKNQ6E0U4 476 aaPredicted RBP9.48□□□□□ -0.89
DDX56-212ENST00000485367 LRFN4Q6PJG9 635 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 ARL9Q6T311 187 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 CPOQ8IVL8 374 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 PDZD9Q8IXQ8 264 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 ARL6IP6Q8N6S5 226 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 BBS1Q8NFJ9 593 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 OR2V1Q8NHB1 315 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 PCNPQ8WW12 178 aaKnown RBP9.48□□□□□ -0.89
DDX56-212ENST00000485367 ARL5BQ96KC2 179 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 HRASLSQ9HDD0 168 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 NDRG3Q9UGV2 375 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 CLEC4AQ9UMR7 237 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 MED13LQ71F56 2210 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 HEATR5AQ86XA9 2040 aa9.48□□□□□ -0.89
DDX56-212ENST00000485367 A0A0J9YW62 118 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PDCD5O14737 125 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 FCMRO60667 390 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 HRGP04196 525 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 HIST1H2ABP04908 130 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 SFTPDP35247 375 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 MNDAP41218 407 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 RAB13P51153 203 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 P2RX1P51575 399 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 SEC61A1P61619 476 aaKnown RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 POU4F2Q12837 409 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 FOXF1Q12946 379 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 GK2Q14410 553 aaPredicted RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 HLXQ14774 488 aaPredicted RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 ACSM3Q53FZ2 586 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 ZNF474Q6S9Z5 364 aaPredicted RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 ESPNLQ6ZVH7 1005 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 FAM214BQ7L5A3 538 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 HIST3H2AQ7L7L0 130 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 OLIG3Q7RTU3 272 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 STPG2Q8N412 459 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 ZNF610Q8N9Z0 462 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 OR52L1Q8NGH7 329 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 HIST1H2ACQ93077 130 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 ADGRG7Q96K78 797 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PGLYRP3Q96LB9 341 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 RBM14Q96PK6 669 aaKnown RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 SEC22CQ9BRL7 303 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 CTPS2Q9NRF8 586 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 HAO2Q9NYQ3 351 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 KLHL9Q9P2J3 617 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 ST6GALNAC2Q9UJ37 374 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 MCTS1Q9ULC4 181 aaKnown RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 ICAM5Q9UMF0 924 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 EDARQ9UNE0 448 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PROCRQ9UNN8 238 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PLEKHA6Q9Y2H5 1048 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 EMC9Q9Y3B6 208 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 CHST2Q9Y4C5 530 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 CH25HO95992 272 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 AK1P00568 194 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 CGAP01215 116 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 CCR4P51679 360 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 SUMO3P55854 103 aaPredicted RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 CARD18P57730 90 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PSMA6P60900 246 aaKnown RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 GMFBP60983 142 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 FUT5Q11128 374 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 TOMM34Q15785 309 aaPredicted RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 ARHGAP11BQ3KRB8 267 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PDSS1Q5T2R2 415 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 SPNS3Q6ZMD2 512 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 Q6ZTK2 550 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 KRT77Q7Z794 578 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 RNF113BQ8IZP6 322 aaKnown RBP9.47□□□□□ -0.89
DDX56-212ENST00000485367 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 ORAI1Q96D31 301 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 CXorf58Q96LI9 332 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 ELOVL5Q9NYP7 299 aa9.47□□□□□ -0.89
DDX56-212ENST00000485367 PRRC2AP48634 2157 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms