RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 OR7A5Q15622 319 aa1□□□□□ -2.25
VPS50-216ENST00000484954 PYDC2Q56P42 97 aa1□□□□□ -2.25
VPS50-216ENST00000484954 CT45A1Q5HYN5 189 aa1□□□□□ -2.25
VPS50-216ENST00000484954 ARMC12Q5T9G4 340 aa1□□□□□ -2.25
VPS50-216ENST00000484954 UBE2UQ5VVX9 321 aa1□□□□□ -2.25
VPS50-216ENST00000484954 MED27Q6P2C8 311 aa1□□□□□ -2.25
VPS50-216ENST00000484954 TMEM220Q6QAJ8 160 aa1□□□□□ -2.25
VPS50-216ENST00000484954 USP50Q70EL3 339 aaPredicted RBP1□□□□□ -2.25
VPS50-216ENST00000484954 TAS2R42Q7RTR8 314 aa1□□□□□ -2.25
VPS50-216ENST00000484954 CSGALNACT2Q8N6G5 542 aa1□□□□□ -2.25
VPS50-216ENST00000484954 Q8NDZ9 215 aa1□□□□□ -2.25
VPS50-216ENST00000484954 OR11H7Q8NGC8 314 aa1□□□□□ -2.25
VPS50-216ENST00000484954 CT45A3Q8NHU0 189 aa1□□□□□ -2.25
VPS50-216ENST00000484954 CAPSLQ8WWF8 208 aa1□□□□□ -2.25
VPS50-216ENST00000484954 DCPSQ96C86 337 aaKnown RBP1□□□□□ -2.25
VPS50-216ENST00000484954 PANX1Q96RD7 426 aa1□□□□□ -2.25
VPS50-216ENST00000484954 MICU1Q9BPX6 476 aa1□□□□□ -2.25
VPS50-216ENST00000484954 MARVELD1Q9BSK0 173 aa1□□□□□ -2.25
VPS50-216ENST00000484954 PKIBQ9C010 78 aa1□□□□□ -2.25
VPS50-216ENST00000484954 RHBDL2Q9NX52 303 aa1□□□□□ -2.25
VPS50-216ENST00000484954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.99□□□□□ -2.25
VPS50-216ENST00000484954 ADGRA3Q8IWK6 1321 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 LRRIQ3A6PVS8 624 aaPredicted RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 SIRPB1O00241 398 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 CHMP2AO43633 222 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 EIF4E2O60573 245 aaKnown RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 KLHL41O60662 606 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 PLIN3O60664 434 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 FKBP6O75344 327 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 OR2F2O95006 317 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 KRT14P02533 472 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 CD28P10747 220 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 ATF6P18850 670 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 OTX1P32242 354 aaPredicted RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 FOXN2P32314 431 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 MPV17P39210 176 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 GALR1P47211 349 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 ATP5IP56385 69 aaPredicted RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 CYP24A1Q07973 514 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 SIGLEC14Q08ET2 396 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 HSDL1Q3SXM5 330 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 KLHL12Q53G59 568 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 PPM1LQ5SGD2 360 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 CCDC183Q5T5S1 534 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 C9orf135Q5VTT2 229 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 GPR107Q5VW38 600 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 C22orf42Q6IC83 251 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 REEP3Q6NUK4 255 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 PRSS54Q6PEW0 395 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 MBOAT1Q6ZNC8 495 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 SLC16A14Q7RTX9 510 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 NANOGNBQ7Z5D8 188 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 OR56B2PQ8NGI1 322 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 N4BP2L2Q92802 583 aaPredicted RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 SLC38A4Q969I6 547 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 ZBED3Q96IU2 234 aaPredicted RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 TGS1Q96RS0 853 aaKnown RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 CHCHD7Q9BUK0 85 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 ZNF160Q9HCG1 818 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 CSNK1G1Q9HCP0 422 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 HRASLS2Q9NWW9 162 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 RABL2BQ9UNT1 228 aa0.99□□□□□ -2.25
VPS50-216ENST00000484954 RRP15Q9Y3B9 282 aaKnown RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 KMT2BQ9UMN6 2715 aaPredicted RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 PRRC2BQ5JSZ5 2229 aaKnown RBP0.99□□□□□ -2.25
VPS50-216ENST00000484954 AKNAQ7Z591 1439 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 TRBV11-1A0A0K0K1C0 115 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 TRIM64CA6NLI5 447 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 C9JVG2 144 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 SMKR1H3BMG3 65 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.98□□□□□ -2.25
VPS50-216ENST00000484954 RAD51CO43502 376 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 ERLIN1O75477 346 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 CLDN11O75508 207 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 CIB2O75838 187 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 IGLV2-8P01709 118 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 FTH1P02794 183 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 IGLV7-43P04211 117 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 ARG1P05089 322 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 OR1E1P30953 314 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 BMI1P35226 326 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 SLC1A1P43005 524 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 RPS15P62841 145 aaKnown RBP0.98□□□□□ -2.25
VPS50-216ENST00000484954 ELF3P78545 371 aaPredicted RBP0.98□□□□□ -2.25
VPS50-216ENST00000484954 ILKQ13418 452 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 PPP1R7Q15435 360 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 HSP90AB3PQ58FF7 597 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 METAP1DQ6UB28 335 aaPredicted RBP0.98□□□□□ -2.25
VPS50-216ENST00000484954 SCD5Q86SK9 330 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 TMEM150AQ86TG1 271 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 GPR26Q8NDV2 337 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 OR4M1Q8NGD0 313 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 OR4A4PQ8NGN8 299 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 OR1J4Q8NGS1 313 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 GPR82Q96P67 336 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 RETNQ9HD89 108 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 ZNF492Q9P255 531 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 LGALS13Q9UHV8 139 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 PITPNC1Q9UKF7 332 aa0.98□□□□□ -2.25
VPS50-216ENST00000484954 SLC17A4Q9Y2C5 497 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms