RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 AMIGO2Q86SJ2 522 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
MSH5-216ENST00000484309 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 OR51F2Q8NH61 342 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 OR5K1Q8NHB7 308 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 SPRYD4Q8WW59 207 aaPredicted RBP10.36□□□□□ -0.75
MSH5-216ENST00000484309 KCNJ15Q99712 375 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 SLC30A2Q9BRI3 323 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 ABHD6Q9BV23 337 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 SLC25A19Q9HC21 320 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 BRD7Q9NPI1 651 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 PAPOLBQ9NRJ5 636 aaKnown RBP10.36□□□□□ -0.75
MSH5-216ENST00000484309 TMEM100Q9NV29 134 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 TVP23BQ9NYZ1 205 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 PLPP2O43688 288 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 CIB2O75838 187 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 CYB5R3P00387 301 aaPredicted RBP10.35□□□□□ -0.75
MSH5-216ENST00000484309 IGHV2-70P01814 119 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 HMGN1P05114 100 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 ANXA2P07355 339 aaKnown RBP10.35□□□□□ -0.75
MSH5-216ENST00000484309 CA6P23280 308 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 HSD11B1P28845 292 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 SRP14P37108 136 aaKnown RBP10.35□□□□□ -0.75
MSH5-216ENST00000484309 SRP9P49458 86 aaKnown RBP10.35□□□□□ -0.75
MSH5-216ENST00000484309 CRISP1P54107 249 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 ZMYND11Q15326 602 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 GFOD2Q3B7J2 385 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 FAHD2BQ6P2I3 314 aaPredicted RBP10.35□□□□□ -0.75
MSH5-216ENST00000484309 FAHD1Q6P587 224 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 CXXC5Q7LFL8 322 aaKnown RBP10.35□□□□□ -0.75
MSH5-216ENST00000484309 TIGD4Q8IY51 512 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 LRTOMTQ8WZ04 291 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 NRBF2Q96F24 287 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 FAHD2AQ96GK7 314 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 SIGLEC11Q96RL6 698 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 SEMA6AQ9H2E6 1030 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 MARCH7Q9H992 704 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 GCM1Q9NP62 436 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 KRT84Q9NSB2 600 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 KLHDC2Q9Y2U9 406 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 AP4S1Q9Y587 144 aa10.35□□□□□ -0.75
MSH5-216ENST00000484309 CD300LBA8K4G0 201 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 PHF1O43189 567 aaPredicted RBP10.34□□□□□ -0.75
MSH5-216ENST00000484309 MRPL3P09001 348 aaKnown RBP10.34□□□□□ -0.75
MSH5-216ENST00000484309 FASP25445 335 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 SLC15A1P46059 708 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 HCCSP53701 268 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 SEC61A1P61619 476 aaKnown RBP10.34□□□□□ -0.75
MSH5-216ENST00000484309 BTG1P62324 171 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 GRB2P62993 217 aaKnown RBP10.34□□□□□ -0.75
MSH5-216ENST00000484309 LCN2P80188 198 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 APOFQ13790 326 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 OR8G1Q15617 311 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 SNAPC1Q16533 368 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 FAM57BQ71RH2 274 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 SHFQ7M4L6 423 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 THEM6Q8WUY1 208 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 RNF133Q8WVZ7 376 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 ADAT1Q9BUB4 502 aaKnown RBP10.34□□□□□ -0.75
MSH5-216ENST00000484309 TTTY10Q9BZA0 68 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 MMADHCQ9H3L0 296 aaPredicted RBP10.34□□□□□ -0.75
MSH5-216ENST00000484309 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 PCDHB10Q9UN67 800 aa10.34□□□□□ -0.75
MSH5-216ENST00000484309 FBN1P35555 2871 aaKnown RBP10.33□□□□□ -0.76
MSH5-216ENST00000484309 TRAV20A0A0B4J274 112 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 RNF212BA8MTL3 300 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 G3V2T6 193 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 TMEM178BH3BS89 294 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 PRODHO43272 600 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 PRKYO43930 277 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 LYNP07948 512 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 H2BFMP0C1H6 154 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 PCMT1P22061 227 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 SLC2A5P22732 501 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 EPHA2P29317 976 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 PMELP40967 661 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 ZNF121P58317 390 aaPredicted RBP10.33□□□□□ -0.76
MSH5-216ENST00000484309 HOXA4Q00056 320 aaPredicted RBP10.33□□□□□ -0.76
MSH5-216ENST00000484309 MAB21L1Q13394 359 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 PTGES3Q15185 160 aaKnown RBP10.33□□□□□ -0.76
MSH5-216ENST00000484309 TIGD6Q17RP2 521 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 LRRN1Q6UXK5 716 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 BCDIN3DQ7Z5W3 292 aaKnown RBP10.33□□□□□ -0.76
MSH5-216ENST00000484309 C19orf18Q8NEA5 215 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 OR56B2PQ8NGI1 322 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 OTOSQ8NHW6 89 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 DNAJC9Q8WXX5 260 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 REPIN1Q9BWE0 567 aaKnown RBP10.33□□□□□ -0.76
MSH5-216ENST00000484309 TEX12Q9BXU0 123 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 G6PC2Q9NQR9 355 aa10.33□□□□□ -0.76
MSH5-216ENST00000484309 LOC105371242A0A075B767 164 aa10.32□□□□□ -0.76
MSH5-216ENST00000484309 CCDC182A6NF36 153 aa10.32□□□□□ -0.76
MSH5-216ENST00000484309 SAC3D1A6NKF1 404 aa10.32□□□□□ -0.76
MSH5-216ENST00000484309 PSMD9O00233 223 aa10.32□□□□□ -0.76
MSH5-216ENST00000484309 XRCC2O43543 280 aa10.32□□□□□ -0.76
MSH5-216ENST00000484309 FAM20BO75063 409 aa10.32□□□□□ -0.76
MSH5-216ENST00000484309 PNPP00491 289 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms