RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 BEND2Q8NDZ0 799 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR4M2Q8NGB6 313 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR51L1Q8NGJ5 315 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR6N2Q8NGY6 317 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR2G2Q8NGZ5 317 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 RNF128Q8TEB7 428 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 SMIM4Q8WVI0 70 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 HGDQ93099 445 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 MBD6Q96DN6 1003 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 NEDD4LQ96PU5 975 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR14A2Q96R54 314 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR8B4Q96RC9 309 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 OR6C1Q96RD1 312 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 TRIB1Q96RU8 372 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 PTGES2Q9H7Z7 377 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 NOX4Q9NPH5 578 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 FAM212BQ9NTI7 297 aaPredicted RBP6.84□□□□□ -1.31
SNX13-208ENST00000482558 DDX28Q9NUL7 540 aaKnown RBP6.84□□□□□ -1.31
SNX13-208ENST00000482558 TAS2R8Q9NYW2 309 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 KLHL9Q9P2J3 617 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 CKLFQ9UBR5 152 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 CTSFQ9UBX1 484 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 MRM2Q9UI43 246 aaKnown RBP6.84□□□□□ -1.31
SNX13-208ENST00000482558 KCNG2Q9UJ96 466 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 IKZF2Q9UKS7 526 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 COPS3Q9UNS2 423 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 C5orf42Q9H799 3197 aa6.84□□□□□ -1.31
SNX13-208ENST00000482558 TRBV5-7A0A0A0MS05 114 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 A0A0A6YYH2 397 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 C13orf42A0A1B0GVH6 325 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 A0A1W2PNV4 684 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 FAM230AA0A1W2PPH8 454 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SLC22A23A1A5C7 686 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 A6NJ64 397 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 OR4C45A6NMZ5 311 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 FTCDNL1E5RQL4 147 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 NPIPA5E9PKD4 350 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 ZNF593O00488 134 aaPredicted RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 TFECO14948 347 aaPredicted RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 ST8SIA3O43173 380 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SCO2O43819 266 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 KHDRBS3O75525 346 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 SCGB2A1O75556 95 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SERPINI2O75830 405 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 HLA-DQA2P01906 255 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 KLK3P07288 261 aaPredicted RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 ZNF823P16415 610 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 ATF1P18846 271 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 PPIFP30405 207 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 FAUP35544 74 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 RIDAP52758 137 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 ART1P52961 327 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 RAC3P60763 192 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 CCL7P80098 99 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 MRPS15P82914 257 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 MAB21L1Q13394 359 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 GPR176Q14439 515 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SLC17A1Q14916 467 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 ZMYND11Q15326 602 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 STK11Q15831 433 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 HLA-BQ31612 363 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SLC25A35Q3KQZ1 300 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 ELFN2Q5R3F8 820 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SERTAD4-AS1Q5TG53 156 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 TMEM108Q6UXF1 575 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 STAC2Q6ZMT1 411 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 ZNF704Q6ZNC4 412 aaPredicted RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 SERPINA12Q8IW75 414 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 GRPEL2Q8TAA5 225 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 THEM6Q8WUY1 208 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 GLMPQ8WWB7 406 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 FCAMRQ8WWV6 532 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 AKAP1Q92667 903 aaKnown RBP eCLIP6.83□□□□□ -1.32
SNX13-208ENST00000482558 SLC25A36Q96CQ1 311 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 ST6GAL2Q96JF0 529 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 RBP7Q96R05 134 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 OR2M2Q96R28 347 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 GFM1Q96RP9 751 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 CDX2Q99626 313 aaPredicted RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 CMKLR1Q99788 373 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 PDCD1LG2Q9BQ51 273 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 MMP28Q9H239 520 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SYT4Q9H2B2 425 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 PPIL3Q9H2H8 161 aaKnown RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 SLC6A15Q9H2J7 730 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 GPN1Q9HCN4 374 aaPredicted RBP6.83□□□□□ -1.32
SNX13-208ENST00000482558 CHST11Q9NPF2 352 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 B3GAT2Q9NPZ5 323 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 PPP4R1LQ9P1A2 415 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 NPIPA1Q9UND3 350 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 FOXJ3Q9UPW0 622 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SEC16AO15027 2179 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 SPTBP11277 2137 aa6.83□□□□□ -1.32
SNX13-208ENST00000482558 GON4LQ3T8J9 2241 aa6.82□□□□□ -1.32
SNX13-208ENST00000482558 TP53BP1Q12888 1972 aaPredicted RBP6.82□□□□□ -1.32
SNX13-208ENST00000482558 CACNA1EQ15878 2313 aa6.82□□□□□ -1.32
SNX13-208ENST00000482558 IGLV1-36A0A0B4J1U3 117 aa6.82□□□□□ -1.32
SNX13-208ENST00000482558 TRBV11-1A0A0K0K1C0 115 aa6.82□□□□□ -1.32
SNX13-208ENST00000482558 LOC102725191A0A1B0GVB3 256 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms