RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ENTPD6O75354 484 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 GPX5O75715 221 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 GLCEO94923 617 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 MPZL1O95297 269 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 OR8G3PP0DMU2 310 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 NPR2P20594 1047 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 PSMB1P20618 241 aaKnown RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 SLC2A5P22732 501 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 FMO3P31513 532 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 VEGFCP49767 419 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 AKR1D1P51857 326 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 CDH11P55287 796 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 MRPS34P82930 218 aaKnown RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 HSF2Q03933 536 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 SRSF1Q07955 248 aaKnown RBP eCLIP10.14□□□□□ -0.79
HPS4-212ENST00000481910 HABP2Q14520 560 aaPredicted RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 GABRA6Q16445 453 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 FBXL19-AS1Q494R0 122 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 SLC35D3Q5M8T2 416 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 FDX2Q6P4F2 183 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 MEPCEQ7L2J0 689 aaKnown RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 LRRC18Q8N456 261 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 SLC22A24Q8N4F4 322 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 ZNF511Q8NB15 262 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 OR1K1Q8NGR3 316 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 OR6F1Q8NGZ6 308 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 CNIH3Q8TBE1 160 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 RNASE6Q93091 150 aaKnown RBP10.14□□□□□ -0.79
HPS4-212ENST00000481910 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 SSX3Q99909 188 aa10.14□□□□□ -0.79
HPS4-212ENST00000481910 A0A0X1KG70 313 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SLC22A31A6NKX4 558 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SGCEO43556 437 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 FARS2O95363 451 aaKnown RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 SCG5P05408 212 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SBK2P0C263 348 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 MSR1P21757 451 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 MYF6P23409 242 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 DEFA6Q01524 100 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 MEP1BQ16820 701 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 LINC01590Q5TEZ4 76 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 FAM27BQ5VT28 67 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 AGAP6Q5VW22 663 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 OTPQ5XKR4 325 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 LYPD4Q6UWN0 246 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 ZNF627Q7L945 461 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 CLRN3Q8NCR9 226 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SLC26A10Q8NG04 563 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 APH1BQ8WW43 257 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 BCL2L2Q92843 193 aaPredicted RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 NABP1Q96AH0 204 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 ZMYND19Q96E35 227 aaPredicted RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 VRK1Q99986 396 aaPredicted RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 POLE4Q9NR33 117 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 TAS2R3Q9NYW6 316 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 MFSD2BA6NFX1 497 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 TVP23AA6NH52 213 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 WBP4O75554 376 aaKnown RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 TFP02787 698 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 ZNF823P16415 610 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 RPL35P42766 123 aaKnown RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 CDK5R2Q13319 367 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 ALKBH1Q13686 389 aaKnown RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 LCN1P1Q5VSP4 162 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 FOXL2NBQ6ZUU3 175 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 THNSL2Q86YJ6 484 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SKA3Q8IX90 412 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 C1orf162Q8NEQ5 155 aaPredicted RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 STEAP2Q8NFT2 490 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SSC4DQ8WTU2 575 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 C11orf40Q8WZ69 217 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 ST8SIA4Q92187 359 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 SNAPC3Q92966 411 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 S100PBPQ96BU1 408 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 OR5M11Q96RB7 305 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 COPS4Q9BT78 406 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 WDR76Q9H967 626 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 AMBNQ9NP70 447 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 EMC7Q9NPA0 242 aa10.13□□□□□ -0.79
HPS4-212ENST00000481910 MRPL22Q9NWU5 206 aaKnown RBP10.13□□□□□ -0.79
HPS4-212ENST00000481910 HCFC1P51610 2035 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 A0A087WXM4 84 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 A0A1W2PR80 420 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 CCDC182A6NF36 153 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 ITGB1BP1O14713 200 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 GPRIN2O60269 458 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 RPP14O95059 124 aaKnown RBP10.12□□□□□ -0.79
HPS4-212ENST00000481910 GAAP10253 952 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 PTAFRP25105 342 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
HPS4-212ENST00000481910 ERP29P30040 261 aaKnown RBP10.12□□□□□ -0.79
HPS4-212ENST00000481910 HTR1FP30939 366 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 NUDT6P53370 316 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 TMBIM6P55061 237 aa10.12□□□□□ -0.79
HPS4-212ENST00000481910 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
HPS4-212ENST00000481910 ADAM8P78325 824 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms