RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GOLGA8HP0CJ92 632 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 LIPCP11150 499 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 RNH1P13489 461 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 TRNP1Q6NT89 227 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 Q6ZVH6 145 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 UNC93AQ86WB7 457 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 NAXDQ8IW45 347 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 WDFY1Q8IWB7 410 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SPAG16Q8N0X2 631 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 NDRG1Q92597 394 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 TADA1Q96BN2 335 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 CXorf40BQ96DE9 158 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 ZFP3Q96NJ6 502 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MCCC1Q96RQ3 725 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 SLC35A5Q9BS91 424 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 TMEM59Q9BXS4 323 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 BOLA2Q9H3K6 86 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 DMAP1Q9NPF5 467 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 DEPPQ9NTK1 212 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 HRASLS2Q9NWW9 162 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SNX24Q9Y343 169 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 KIR2DS1A0A191URI9 304 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 AIM2O14862 343 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 ZNF749O43361 778 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 IGLV2-14P01704 120 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 IGHV4-59P01825 116 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 CEACAM8P31997 349 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 CDC20Q12834 499 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 KIR2DS1Q14954 304 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 DNAL1Q4LDG9 190 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MARC1Q5VT66 337 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 C8orf82Q6P1X6 216 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 TRIM40Q6P9F5 258 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MTERF4Q7Z6M4 381 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 MRGPRGQ86SM5 289 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 APLFQ8IW19 511 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 PUSL1Q8N0Z8 303 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 FAM76AQ8TAV0 307 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 FBXO25Q8TCJ0 367 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 GPR151Q8TDV0 419 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 B3GALT6Q96L58 329 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 ZNF681Q96N22 645 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 RBKSQ9H477 322 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 FZD3Q9NPG1 666 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MRPL40Q9NQ50 206 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 TAS2R9Q9NYW1 312 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MAN1B1Q9UKM7 699 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 UBQLN1Q9UMX0 589 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 SAMHD1Q9Y3Z3 626 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 SPTAN1Q13813 2472 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 TANC2Q9HCD6 1990 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 NOTCH2Q04721 2471 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 GON4LQ3T8J9 2241 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SPTA1P02549 2419 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SDK2Q58EX2 2172 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 GLYATL1P3A0A0U1RQE8 302 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 A0A1W2PQL4 384 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 SLC5A10A0PJK1 596 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 NCBP2LA6PVI3 153 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 B8ZZF3 427 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SULT1C2O00338 296 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 DCTN6O00399 190 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SLC2A2P11168 524 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 LIFP15018 202 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 COX5AP20674 150 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 BTCP35070 178 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MAS1LP35410 378 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 CASP8Q14790 479 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 PTGR1Q14914 329 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 EMC2Q15006 297 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 OXA1LQ15070 435 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 PIGGQ5H8A4 983 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 C1orf189Q5VU69 101 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 TIPARPQ7Z3E1 657 aaKnown RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 GGNQ86UU5 652 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 JAGN1Q8N5M9 183 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 NANOGP1Q8N7R0 232 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 C15orf54Q8N8G6 183 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 RPLP0P6Q8NHW5 317 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 TMED6Q8WW62 240 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 HGDQ93099 445 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 RCHY1Q96PM5 261 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 CLCC1Q96S66 551 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 TSG101Q99816 390 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 SCAND2PQ9GZW5 306 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 SAV1Q9H4B6 383 aaPredicted RBP2.67□□□□□ -1.98
SMC6-208ENST00000481708 BFARQ9NZS9 450 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 MYRFQ9Y2G1 1151 aa2.67□□□□□ -1.98
SMC6-208ENST00000481708 HUWE1Q7Z6Z7 4374 aaKnown RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 TMEM238C9JI98 176 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RAMP2O60895 175 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 MPDU1O75352 247 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 CSNK2A2P19784 350 aaPredicted RBP2.66□□□□□ -1.98
SMC6-208ENST00000481708 ACVRL1P37023 503 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RFC3P40938 356 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 CXCL12P48061 93 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 RFX3P48380 749 aa2.66□□□□□ -1.98
SMC6-208ENST00000481708 IDH2P48735 452 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms