RNA–Protein interactions for RNA: ENST00000480907.5

NUB1-208, Transcript of negative regulator of ubiquitin like proteins 1, human

TSL 5

Gene NUB1, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUB1-208	ENST00000480907	KCNJ16	Q9NPI9	418 aa		2.7	□□□□□ -1.98
NUB1-208	ENST00000480907	SAMSN1	Q9NSI8	373 aa	Known RBP	2.7	□□□□□ -1.98
NUB1-208	ENST00000480907	C15orf41	Q9Y2V0	281 aa		2.7	□□□□□ -1.98
NUB1-208	ENST00000480907	COL27A1	Q8IZC6	1860 aa	Predicted RBP	2.7	□□□□□ -1.98
NUB1-208	ENST00000480907	BRWD3	Q6RI45	1802 aa		2.7	□□□□□ -1.98
NUB1-208	ENST00000480907	RAB19	A4D1S5	217 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	EIF4E2	O60573	245 aa	Known RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	SCEL	O95171	688 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	FGFR1OP	O95684	399 aa	Known RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	CLIC3	O95833	236 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	SNAI1	O95863	264 aa	Predicted RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	CCNE2	O96020	404 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	APCS	P02743	223 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	OR56A5	P0C7T3	313 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	OR5H8	P0DN80	308 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	RAB3B	P20337	219 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	CCNO	P22674	350 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	DCK	P27707	260 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	LCN1	P31025	176 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	OPRK1	P41145	380 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	TPM4	P67936	248 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	RAD51	Q06609	339 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	TWF1	Q12792	350 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	CDH17	Q12864	832 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	IRF4	Q15306	451 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	SMUG1	Q53HV7	270 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	TTC23L	Q6PF05	361 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	MRPL21	Q7Z2W9	205 aa	Known RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	FBXO36	Q8NEA4	188 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	OR4A15	Q8NGL6	344 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	CCDC12	Q8WUD4	166 aa	Predicted RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	PIH1D2	Q8WWB5	315 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	XPO6	Q96QU8	1125 aa	Known RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	SLC29A1	Q99808	456 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	MYEF2	Q9P2K5	600 aa	Known RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	CTSF	Q9UBX1	484 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	LGALS13	Q9UHV8	139 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	DDX19B	Q9UMR2	479 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	SLC17A4	Q9Y2C5	497 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	TSSC4	Q9Y5U2	329 aa	Predicted RBP	2.69	□□□□□ -1.98
NUB1-208	ENST00000480907		S4R3C0	116 aa		2.69	□□□□□ -1.98
NUB1-208	ENST00000480907	MAPK8IP3	Q9UPT6	1336 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	TMEM120B	A0PK00	339 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907		M0R3G1	203 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	SIVA1	O15304	175 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	TPM3	P06753	285 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	SERPINE2	P07093	398 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CT45A6	P0DMU7	189 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CT45A5	P0DMU8	189 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CT45A7	P0DMV0	189 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	RNASE2	P10153	161 aa	Known RBP	2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	ZNF250	P15622	560 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	KIR3DL2	P43630	455 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CCNG1	P51959	295 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	RND2	P52198	227 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	MAP3K7CL	P57077	242 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	COTL1	Q14019	142 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CT45A1	Q5HYN5	189 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	PPM1L	Q5SGD2	360 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	METTL21C	Q5VZV1	264 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	APRG1	Q8IVJ8	170 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CMTM1	Q8IZ96	169 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	ZFP41	Q8N8Y5	198 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	C8orf31	Q8N9H6	132 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CLHC1	Q8NHS4	586 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CT45A3	Q8NHU0	189 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	CIRBP-AS1	Q8TBR5	109 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	OPALIN	Q96PE5	141 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	TMEM175	Q9BSA9	504 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	HINT2	Q9BX68	163 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	TM6SF2	Q9BZW4	377 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	ZC4H2	Q9NQZ6	224 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	DDX19A	Q9NUU7	478 aa	Known RBP	2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	HRASLS2	Q9NWW9	162 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	KPTN	Q9Y664	436 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	SAR1B	Q9Y6B6	198 aa		2.68	□□□□□ -1.98
NUB1-208	ENST00000480907	IGLV1-36	A0A0B4J1U3	117 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	GLYATL1P3	A0A0U1RQE8	302 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	ZNF850	A8MQ14	1090 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	LYRM9	A8MSI8	78 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	PDZK1P1	A8MUH7	402 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	BPY2	O14599	106 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	SCAMP2	O15127	329 aa	Known RBP	2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	SOCS1	O15524	211 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	KDELR3	O43731	214 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	AQP8	O94778	261 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	HOXB8	P17481	243 aa	Predicted RBP	2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	GPX4	P36969	197 aa	Predicted RBP	2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	TNFSF9	P41273	254 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	HTR2B	P41595	481 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	NCF4	Q15080	339 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	THEM4	Q5T1C6	240 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	GPR107	Q5VW38	600 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	H3F3C	Q6NXT2	135 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	SPESP1	Q6UW49	350 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	NDUFAF7	Q7L592	441 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	SNX20	Q7Z614	316 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	CD302	Q8IX05	232 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	PRSS58	Q8IYP2	241 aa		2.67	□□□□□ -1.98
NUB1-208	ENST00000480907	ST13P4	Q8IZP2	240 aa	Predicted RBP	2.67	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms