RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CRYBB2P43320 205 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 NR4A2P43354 598 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 CAPZA2P47755 286 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 GZMKP49863 264 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 PPP1CBP62140 327 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 CBX1P83916 185 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 PPP2R2BQ00005 443 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 FMODQ06828 376 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 NPRL3Q12980 569 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 TNK1Q13470 666 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 GGTLC2Q14390 218 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RAB39AQ14964 217 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RSPO1Q2MKA7 263 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 TMEM95Q3KNT9 176 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 LINC01590Q5TEZ4 76 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SLC18B1Q6NT16 456 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 LEG1Q6P5S2 330 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 TIGD4Q8IY51 512 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 PRR18Q8N4B5 295 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SPERTQ8NA61 448 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 CCDC54Q8NEL0 328 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 OR52H1Q8NGJ2 320 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 OR1F12Q8NHA8 337 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 OR5K1Q8NHB7 308 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 FGFBP3Q8TAT2 258 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 KLF14Q8TD94 323 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SNX33Q8WV41 574 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RNF133Q8WVZ7 376 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RDH5Q92781 318 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 NEUROG1Q92886 237 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SPSB4Q96A44 273 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SLCO4A1Q96BD0 722 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 CCDC124Q96CT7 223 aaKnown RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 ELMOD3Q96FG2 381 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SAMD8Q96LT4 415 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RDH12Q96NR8 316 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SORCS2Q96PQ0 1159 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 NMNAT3Q96T66 252 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 MYCBPQ99417 103 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SH3GL3Q99963 347 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 PIMREGQ9BSJ6 248 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SOX7Q9BT81 388 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 IFT27Q9BW83 186 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 GABARAPL3Q9BY60 117 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 MRPL37Q9BZE1 423 aaKnown RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RNF121Q9H920 327 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 ABCB9Q9NP78 766 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 PNRC2Q9NPJ4 139 aaKnown RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 HINT3Q9NQE9 182 aaKnown RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 PLEK2Q9NYT0 353 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 USE1Q9NZ43 259 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 LPAR3Q9UBY5 353 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 IL19Q9UHD0 177 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SCOCQ9UIL1 159 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 LHFPL6Q9Y693 200 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 TMEM14AQ9Y6G1 99 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 ROS1P08922 2347 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RAI1Q7Z5J4 1906 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 MAP1AP78559 2803 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PLSCR5A0PG75 271 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 C5orf49A4QMS7 147 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 DHRS7CA6NNS2 312 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 IQCF6A8MYZ5 107 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 G3V2T6 193 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 H7C1Q1 480 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 DCTN6O00399 190 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 GNGT2O14610 69 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF254O75437 659 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ABHD16AO95870 558 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PPIAL4GP0DN37 164 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 VSIG10L2P0DP72 767 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 DAOP14920 347 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ANPEPP15144 967 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF823P16415 610 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF23P17027 643 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SPI1P17947 270 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 GATA3P23771 443 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CDAP32320 146 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CFHR2P36980 270 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 ENTPD1P49961 510 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CHN2P52757 468 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CRISP1P54107 249 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 TPTEP56180 551 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 GRB2P62993 217 aaKnown RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PIGFQ07326 219 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 MZT1Q08AG7 82 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 FOXE3Q13461 319 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CRMP1Q14194 572 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 GALEQ14376 348 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SGCAQ16586 387 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CCDC92Q53HC0 331 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-213ENST00000480102 C1orf146Q5VVC0 180 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 SLX4IPQ5VYV7 408 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 NXNL2Q5VZ03 156 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 TMEM154Q6P9G4 183 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 Q6ZSR3 168 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 CCDC121Q6ZUS5 278 aa4.16□□□□□ -1.74
PTCD3-213ENST00000480102 PRSS45Q7RTY3 260 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms