RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FGFBP3Q8TAT2 258 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 HSD17B8Q92506 261 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 SMIM19Q96E16 107 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 BOD1Q96IK1 185 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 PGLYRP3Q96LB9 341 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 C4orf45Q96LM5 186 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 ATF6BQ99941 703 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 WACQ9BTA9 647 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 FUNDC2Q9BWH2 189 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 MROQ9BYG7 248 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 OR2H1Q9GZK4 316 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 FAM192AQ9GZU8 254 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 NAA50Q9GZZ1 169 aaKnown RBP5.79□□□□□ -1.48
USP48-208ENST00000479177 HDHD2Q9H0R4 259 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 WNT5BQ9H1J7 359 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 PIGMQ9H3S5 423 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 NOX3Q9HBY0 568 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 NDUFA13Q9P0J0 144 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 ATPIF1Q9UII2 106 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 ENPP5Q9UJA9 477 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 FBXL3Q9UKT7 428 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 OSGIN2Q9Y236 505 aa5.79□□□□□ -1.48
USP48-208ENST00000479177 ARPC4-TTLL3A0A0A6YYG9 625 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 PNMA8CA0A1B0GUJ8 204 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 OR4C45A6NMZ5 311 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 H3BSA7 217 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ZNF701M0R085 212 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 DVL2O14641 736 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 LRRTM2O43300 516 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 SGCEO43556 437 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 PLPP2O43688 288 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 SYNGR3O43761 229 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 DOK2O60496 412 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 RAD51DO75771 328 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 LYZL6O75951 148 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 HLA-HP01893 362 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CD1AP06126 327 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CELA3BP08861 270 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ROS1P08922 2347 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 PATE4P0C8F1 98 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CD53P19397 219 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CELP19835 753 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 BMP5P22003 454 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 GADD45AP24522 165 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 GABRA5P31644 462 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CCKARP32238 428 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 OTX1P32242 354 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 DCTDP32321 178 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 GDI2P50395 445 aaKnown RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 GRB2P62993 217 aaKnown RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 PSG4Q00888 419 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 TGFBR3Q03167 851 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ECH1Q13011 328 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 GPR50Q13585 617 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ALKBH1Q13686 389 aaKnown RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 P2RY6Q15077 328 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 GABRA6Q16445 453 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 C21orf62-AS1Q17RA5 79 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ZNF829Q3KNS6 432 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 KRTAP27-1Q3LI81 207 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 SLC36A2Q495M3 483 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 PABPC1L2AQ5JQF8 200 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 WDR38Q5JTN6 314 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CD276Q5ZPR3 534 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ZNF774Q6NX45 483 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 RPL22L1Q6P5R6 122 aaKnown RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 MRGPRGQ86SM5 289 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CXorf67Q86X51 503 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 CATSPERDQ86XM0 798 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ANKRD13BQ86YJ7 626 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 C17orf78Q8N4C9 275 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 IL17RDQ8NFM7 739 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 OR2G2Q8NGZ5 317 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 OR1F12Q8NHA8 337 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 AKR7LQ8NHP1 331 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ZNF420Q8TAQ5 688 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 RGP1Q92546 391 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 RND1Q92730 232 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 RPL3LQ92901 407 aaKnown RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 ISOC1Q96CN7 298 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 BBC3Q96PG8 261 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 DOK1Q99704 481 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 COQ7Q99807 217 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 BCL7BQ9BQE9 202 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 KCNN2Q9H2S1 579 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 NIPAL2Q9H841 368 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 MOB1AQ9H8S9 216 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 SLC17A5Q9NRA2 495 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 CENPMQ9NSP4 180 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 FAM206AQ9NX38 181 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 GALNT8Q9NY28 637 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 PLEK2Q9NYT0 353 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 JKAMPQ9P055 326 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 ZNF629Q9UEG4 869 aaPredicted RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 STUB1Q9UNE7 303 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 TIMM10BQ9Y5J6 103 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 R4GMQ9 66 aa5.78□□□□□ -1.48
USP48-208ENST00000479177 HELZ2Q9BYK8 2649 aaKnown RBP5.78□□□□□ -1.48
USP48-208ENST00000479177 CIB4A0PJX0 185 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TMEM212A6NML5 194 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms