RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 IGLV3-9A0A075B6K5 115 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 MT-ND5P03915 603 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 ERCC1P07992 297 aaPredicted RBP13.01□□□□□ -0.33
COL16A1-211ENST00000479100 NAT2P11245 290 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 ANOS1P23352 680 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 HSPA13P48723 471 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 PPOXP50336 477 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 ACTC1P68032 377 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 ACTA1P68133 377 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 ROM1Q03395 351 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 EGR3Q06889 387 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 CDK5R2Q13319 367 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 TIGD6Q17RP2 521 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 KLHL22Q53GT1 634 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 GLYATL3Q5SZD4 288 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 PLEKHG7Q6ZR37 379 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
COL16A1-211ENST00000479100 OR5AS1Q8N127 324 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 GTF3AQ92664 365 aaKnown RBP13.01□□□□□ -0.33
COL16A1-211ENST00000479100 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 GSX2Q9BZM3 304 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 RAB1BQ9H0U4 201 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 OR10A2Q9H208 303 aa13.01□□□□□ -0.33
COL16A1-211ENST00000479100 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
COL16A1-211ENST00000479100 FLNAP21333 2647 aaKnown RBP13.01□□□□□ -0.33
COL16A1-211ENST00000479100 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
COL16A1-211ENST00000479100 TMEM269A0A1B0GVZ9 245 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 H7C417 338 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 SSX4O60224 188 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 RPP14O95059 124 aaKnown RBP13□□□□□ -0.33
COL16A1-211ENST00000479100 FADS2O95864 444 aaKnown RBP13□□□□□ -0.33
COL16A1-211ENST00000479100 IGHV4-39P01824 125 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 RAC2P15153 192 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 PSMA6P60900 246 aaKnown RBP13□□□□□ -0.33
COL16A1-211ENST00000479100 ZNF85Q03923 595 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 ZNF92Q03936 586 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 RAB40BQ12829 278 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 GK2Q14410 553 aaPredicted RBP13□□□□□ -0.33
COL16A1-211ENST00000479100 ZNF829Q3KNS6 432 aaPredicted RBP13□□□□□ -0.33
COL16A1-211ENST00000479100 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 FBXW12Q6X9E4 464 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 PGAP1Q75T13 922 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 LHFPL3Q86UP9 236 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 ACBD7Q8N6N7 88 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 OR52H1Q8NGJ2 320 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 OR52I1Q8NGK6 324 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 SORCS2Q96PQ0 1159 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 MRM2Q9UI43 246 aaKnown RBP13□□□□□ -0.33
COL16A1-211ENST00000479100 GNG8Q9UK08 70 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 MYRFQ9Y2G1 1151 aa13□□□□□ -0.33
COL16A1-211ENST00000479100 GGT3PA6NGU5 568 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 METTL15A6NJ78 407 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 TPD52L2O43399 206 aaKnown RBP12.99□□□□□ -0.33
COL16A1-211ENST00000479100 XRCC2O43543 280 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 SPRY3O43610 288 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 FAM20BO75063 409 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 PAX1P15863 534 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 SELEP16581 610 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 KITLGP21583 273 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 ZNF81P51508 661 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 TP53I3Q53FA7 332 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 FAM220AQ7Z4H9 259 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 LRRC75A-AS1Q8N1F1 130 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 BHLHE23Q8NDY6 225 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 BPIFB6Q8NFQ5 453 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 BARX1Q9HBU1 254 aaPredicted RBP12.99□□□□□ -0.33
COL16A1-211ENST00000479100 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
COL16A1-211ENST00000479100 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 J3QLW9 94 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 J3QRE1 110 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 XPNPEP2O43895 674 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 LY6HO94772 140 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 ZNF19P17023 458 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 DCTDP32321 178 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 EFNA4P52798 201 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 MFGE8Q08431 387 aaPredicted RBP12.98□□□□□ -0.33
COL16A1-211ENST00000479100 SNCBQ16143 134 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 CARTPTQ16568 116 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 TSTQ16762 297 aaKnown RBP12.98□□□□□ -0.33
COL16A1-211ENST00000479100 Q5PR19 223 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 PRSS45Q7RTY3 260 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 COMMD2Q86X83 199 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 OR8B12Q8NGG6 310 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 SPRYD4Q8WW59 207 aaPredicted RBP12.98□□□□□ -0.33
COL16A1-211ENST00000479100 SGK3Q96BR1 496 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 MRPL48Q96GC5 212 aaKnown RBP12.98□□□□□ -0.33
COL16A1-211ENST00000479100 REEP6Q96HR9 211 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 PBOV1Q9GZY1 135 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 CYSLTR2Q9NS75 346 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 MRPS18AQ9NVS2 196 aaKnown RBP12.98□□□□□ -0.33
COL16A1-211ENST00000479100 ZNF319Q9P2F9 582 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 R4GMQ9 66 aa12.98□□□□□ -0.33
COL16A1-211ENST00000479100 ARID1AO14497 2285 aa12.97□□□□□ -0.33
COL16A1-211ENST00000479100 ARFGEF3Q5TH69 2177 aa12.97□□□□□ -0.33
COL16A1-211ENST00000479100 IRGMA1A4Y4 181 aa12.97□□□□□ -0.33
COL16A1-211ENST00000479100 ZSCAN5BA6NJL1 495 aa12.97□□□□□ -0.33
COL16A1-211ENST00000479100 ACOD1A6NK06 481 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms