RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 EFNB2P52799 333 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 ZBED5Q49AG3 693 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 C11orf88Q6PI97 169 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 PGAP1Q75T13 922 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 FAM122BQ7Z309 247 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.09□□□□□ -0.15
VIM-204ENST00000478746 FAM90A1Q86YD7 464 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 FAM156AQ8NDB6 213 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 TSPEARQ8WU66 669 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 PRRC1Q96M27 445 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 TOR3AQ9H497 397 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 NMNAT1Q9HAN9 279 aaPredicted RBP14.09□□□□□ -0.15
VIM-204ENST00000478746 C1orf123Q9NWV4 160 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 LHFPL6Q9Y693 200 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 F5H5K5 113 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 GMDSO60547 372 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 PTBP3O95758 552 aaKnown RBP14.08□□□□□ -0.16
VIM-204ENST00000478746 LCATP04180 440 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 ACSM4P0C7M7 580 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 YAP1P46937 504 aaKnown RBP14.08□□□□□ -0.16
VIM-204ENST00000478746 PRB3Q04118 309 aaPredicted RBP14.08□□□□□ -0.16
VIM-204ENST00000478746 KRR1Q13601 381 aaKnown RBP14.08□□□□□ -0.16
VIM-204ENST00000478746 NANOGP8Q6NSW7 305 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 CORO6Q6QEF8 472 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 NAA40Q86UY6 237 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 RNF113BQ8IZP6 322 aaKnown RBP14.08□□□□□ -0.16
VIM-204ENST00000478746 CMTM4Q8IZR5 234 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 LY6G5BQ8NDX9 201 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 PPP1R35Q8TAP8 253 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 TPD52L3Q96J77 140 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 FNDC11Q9BVV2 318 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 NDEL1Q9GZM8 345 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 NUAK2Q9H093 628 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 SIRT7Q9NRC8 400 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 RHCGQ9UBD6 479 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 KAAG1Q9UBP8 84 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 DNAJB11Q9UBS4 358 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 AURKCQ9UQB9 309 aa14.08□□□□□ -0.16
VIM-204ENST00000478746 COL7A1Q02388 2944 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 CDC42EP2O14613 210 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 IMPA2O14732 288 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 GRPP07492 148 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 ZNF26P17031 533 aaPredicted RBP14.07□□□□□ -0.16
VIM-204ENST00000478746 CYLC2Q14093 348 aaPredicted RBP14.07□□□□□ -0.16
VIM-204ENST00000478746 TRAM2Q15035 370 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 MEP1BQ16820 701 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 CYBRD1Q53TN4 286 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 PGM2L1Q6PCE3 622 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 ZNF826PQ6ZT77 177 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 MRPL21Q7Z2W9 205 aaKnown RBP14.07□□□□□ -0.16
VIM-204ENST00000478746 CALHM3Q86XJ0 350 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 FGFRL1Q8N441 504 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 KLHDC1Q8N7A1 406 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 OR4S1Q8NGB4 309 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 DMRTB1Q96MA1 342 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 SH3GL1Q99961 368 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 ADAT1Q9BUB4 502 aaKnown RBP14.07□□□□□ -0.16
VIM-204ENST00000478746 VSX1Q9NZR4 365 aaPredicted RBP14.07□□□□□ -0.16
VIM-204ENST00000478746 DNAH3Q8TD57 4116 aa14.07□□□□□ -0.16
VIM-204ENST00000478746 TENM3Q9P273 2699 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 IGHV3OR15-7A0A075B7D8 119 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 hCG_1807616A0A1W2PRN6 198 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 MEIOCA2RUB1 952 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 A6NLC8 198 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 CD300LBA8K4G0 201 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 SDHAP31040 664 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 GPR4P46093 362 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 EMX1Q04741 257 aaPredicted RBP14.06□□□□□ -0.16
VIM-204ENST00000478746 NSUN5P1Q3KNT7 163 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 KRTAP27-1Q3LI81 207 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 RABL3Q5HYI8 236 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 GPR139Q6DWJ6 353 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 TBPL2Q6SJ96 375 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 ZNF730Q6ZMV8 503 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 TMPRSS11FQ6ZWK6 438 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 LYG1Q8N1E2 194 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 GCSAMQ8N6F7 178 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 OR4C13Q8NGP0 309 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 OR2T6Q8NHC8 308 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 STON2Q8WXE9 905 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
VIM-204ENST00000478746 LZICQ8WZA0 190 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 PHF21AQ96BD5 680 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 PITX2Q99697 317 aa14.06□□□□□ -0.16
VIM-204ENST00000478746 A0A087WUU8 490 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 H3BUX3 64 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 SOCS2O14508 198 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 LHBP01229 141 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 VSIG10L2P0DP72 767 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 KDELR2P33947 212 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 SAA4P35542 130 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 MDH1P40925 334 aaKnown RBP14.05□□□□□ -0.16
VIM-204ENST00000478746 DLX1P56177 255 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 SELENOWP63302 87 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 ECH1Q13011 328 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 KLRD1Q13241 179 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 LRRC23Q53EV4 343 aaPredicted RBP14.05□□□□□ -0.16
VIM-204ENST00000478746 TEX36Q5VZQ5 186 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 ERICH5Q6P6B1 374 aa14.05□□□□□ -0.16
VIM-204ENST00000478746 MBOAT2Q6ZWT7 520 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms