RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MALLQ13021 153 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 KLRD1Q13241 179 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 NFYCQ13952 458 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 FOXB2Q5VYV0 432 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 TEX36Q5VZQ5 186 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 CROCCP2Q86T23 111 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 GCSAMQ8N6F7 178 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 RABEP2Q9H5N1 569 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 VSX1Q9NZR4 365 aaPredicted RBP16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 MAB21L2Q9Y586 359 aa16.56■□□□□ 0.24
PDLIM1-202ENST00000477757 A0A1W2PRD5 423 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 A0A1W2PRF3 423 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 A0A1W2PRM7 423 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 MEIOCA2RUB1 952 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 H3BUX3 64 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 GMDSO60547 372 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 MPIG6BO95866 241 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 PRB3Q04118 309 aaPredicted RBP16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 NSUN5P1Q3KNT7 163 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 PGM2L1Q6PCE3 622 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 PGAP1Q75T13 922 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 LYG1Q8N1E2 194 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 Q8N7P7 452 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 BEND2Q8NDZ0 799 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 TNFRSF14Q92956 283 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 SLCO4A1Q96BD0 722 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 MMP28Q9H239 520 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 NMNAT1Q9HAN9 279 aaPredicted RBP16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 RPS6KA6Q9UK32 745 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 AURKCQ9UQB9 309 aa16.55■□□□□ 0.24
PDLIM1-202ENST00000477757 A0A1B0GW55 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 CDC42EP2O14613 210 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L2P0CJ85 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L3P0CJ86 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L4P0CJ87 422 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L5P0CJ88 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L6P0CJ89 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L7P0CJ90 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 VSIG10L2P0DP72 767 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DLX1P56177 255 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 ACSM1Q08AH1 577 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 CORO6Q6QEF8 472 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4L9Q6RFH8 374 aaPredicted RBP16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 ZNF826PQ6ZT77 177 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 MRPL21Q7Z2W9 205 aaKnown RBP16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 OFCC1Q8IZS5 231 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 PNKDQ8N490 385 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 NUAK2Q9H093 628 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 DUX4Q9UBX2 424 aa16.54■□□□□ 0.24
PDLIM1-202ENST00000477757 IGHV3OR15-7A0A075B7D8 119 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 CD300LBA8K4G0 201 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 K7EIL1 84 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 IMPA2O14732 288 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 FBXO24O75426 580 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 LHBP01229 141 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 IFNA14P01570 189 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 SDHAP31040 664 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 IFNA8P32881 189 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 EMX1Q04741 257 aaPredicted RBP16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 POU4F2Q12837 409 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 MEP1BQ16820 701 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 ADCK1Q86TW2 530 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 OR4F17Q8NGA8 305 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 ACOT11Q8WXI4 607 aaPredicted RBP16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 CLPTM1LQ96KA5 538 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 WWC2-AS2Q96NR7 200 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 OR4F4Q96R69 305 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 NDEL1Q9GZM8 345 aa16.53■□□□□ 0.24
PDLIM1-202ENST00000477757 hCG_1807616A0A1W2PRN6 198 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 A6NLC8 198 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 LCATP04180 440 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 GPR4P46093 362 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 UBE2E1P51965 193 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 ECH1Q13011 328 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 TRAM2Q15035 370 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 ZBED5Q49AG3 693 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 CYBRD1Q53TN4 286 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 GPR139Q6DWJ6 353 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 CRIP3Q6Q6R5 217 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 CFAP77Q6ZQR2 320 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 NDUFA11Q86Y39 141 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 R3HDM4Q96D70 268 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 ATF6BQ99941 703 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 RAB18Q9NP72 206 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 DNAJB11Q9UBS4 358 aa16.52■□□□□ 0.24
PDLIM1-202ENST00000477757 RYR2Q92736 4967 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 F5H5K5 113 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 TRAP1Q12931 704 aaKnown RBP16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 PCK2Q16822 640 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 MICBQ29980 383 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 WDR38Q5JTN6 314 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 NCR3LG1Q68D85 454 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 PTCHD4Q6ZW05 846 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 TMPRSS11FQ6ZWK6 438 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 RNF113BQ8IZP6 322 aaKnown RBP16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 FAM216BQ8N7L0 139 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 C8orf46Q8TAG6 207 aa16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 GPX7Q96SL4 187 aaPredicted RBP16.51■□□□□ 0.23
PDLIM1-202ENST00000477757 CCL13Q99616 98 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms