RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ZSCAN4Q8NAM6 433 aaPredicted RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 C10orf82Q8WW14 230 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ACOT11Q8WXI4 607 aaPredicted RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 H1FXQ92522 213 aaKnown RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ERGIC1Q969X5 290 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 TLCD1Q96CP7 247 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ITPKCQ96DU7 683 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 CLPTM1LQ96KA5 538 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 TSSK2Q96PF2 358 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 NKX3-1Q99801 234 aaPredicted RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 COQ7Q99807 217 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 NUAK2Q9H093 628 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 CNTD2Q9H8S5 307 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 NMNAT1Q9HAN9 279 aaPredicted RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 TMBIM4Q9HC24 238 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 SRA1Q9HD15 236 aaKnown RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ATPIF1Q9UII2 106 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 FOXJ3Q9UPW0 622 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 SIGLEC9Q9Y336 463 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 NOP16Q9Y3C1 178 aaKnown RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 IER3IP1Q9Y5U9 82 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 SNX13Q9Y5W8 968 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 LHFPL6Q9Y693 200 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 CMYA5Q8N3K9 4069 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 A0A087WUU8 490 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 HTR3EA5X5Y0 456 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 H3BUX3 64 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 MRASO14807 208 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 NPFFO15130 113 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 GSTA4O15217 222 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 NDUFA2O43678 99 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 AHCYL1O43865 530 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 FSTL3O95633 263 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 PPP1R3DO95685 299 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 ECDO95905 644 aaPredicted RBP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 RENP00797 406 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OPN1MWP04001 364 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 ACSM4P0C7M7 580 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OPN1MW2P0DN77 364 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OPN1MW3P0DN78 364 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 VSIG10L2P0DP72 767 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 TROVE2P10155 538 aaKnown RBP eCLIP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 POU1F1P28069 291 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 KDELR2P33947 212 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 GZMMP51124 257 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 RPS6KA3P51812 740 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 SELENOWP63302 87 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 SF3A3Q12874 501 aaKnown RBP eCLIP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 COX10Q12887 443 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 TRAP1Q12931 704 aaKnown RBP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 FHL1Q13642 323 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 CDONQ4KMG0 1287 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 FGD3Q5JSP0 725 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 ZBTB37Q5TC79 503 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 GPR139Q6DWJ6 353 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 PGM2L1Q6PCE3 622 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 CFAP77Q6ZQR2 320 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 MBOAT2Q6ZWT7 520 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM122BQ7Z309 247 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 VTCN1Q7Z7D3 282 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 NAA40Q86UY6 237 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 CYP4Z1Q86W10 505 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM90A1Q86YD7 464 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 PNKDQ8N490 385 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 GALNT4Q8N4A0 578 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 KLHDC1Q8N7A1 406 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OR2T12Q8NG77 320 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OR8J3Q8NGG0 315 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OR4C13Q8NGP0 309 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OR8S1Q8NH09 359 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 OR2AE1Q8NHA4 323 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 Q8TCH9 128 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 CCL13Q99616 98 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 ATF6BQ99941 703 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 FN3KQ9H479 309 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 C16orf95Q9H693 158 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 KRCC1Q9NPI7 259 aaPredicted RBP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNRD1Q9P1U0 126 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 RPUSD1Q9UJJ7 312 aaKnown RBP5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 TMEM5Q9Y2B1 443 aa5.5□□□□□ -1.53
RTFDC1-206ENST00000477485 NBEAL2Q6ZNJ1 2754 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 A0A1B0GW55 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 A0A1W2PQ09 198 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 CD300LBA8K4G0 201 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM220BPB1ANY3 271 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 M0R135 149 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 BHLHE40O14503 412 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 TBX1O43435 398 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 NDUFB3O43676 98 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 GMDSO60547 372 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 PEX14O75381 377 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 TSPAN9O75954 239 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L2P0CJ85 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L3P0CJ86 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L4P0CJ87 422 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L5P0CJ88 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L6P0CJ89 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 DUX4L7P0CJ90 424 aa5.49□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF26P17031 533 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms