RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ZNF582Q96NG8 517 aaPredicted RBP10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF184Q99676 751 aaPredicted RBP10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 COPS4Q9BT78 406 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 ABHD6Q9BV23 337 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 ANKRD60Q9BZ19 345 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 TPK1Q9H3S4 243 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 SAP30LQ9HAJ7 183 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 TMEM160Q9NX00 188 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 RAB26Q9ULW5 256 aa10.52□□□□□ -0.73
CLCNKA-205ENST00000477360 IGHV1-69-2A0A0G2JMI3 117 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 ZSCAN5BA6NJL1 495 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 LY6HO94772 140 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 LCATP04180 440 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 LYNP07948 512 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 ALOX5APP20292 161 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 OPRL1P41146 370 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 ISL1P61371 349 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 POU4F2Q12837 409 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 GK2Q14410 553 aaPredicted RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 TAF13Q15543 124 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 HFEQ30201 348 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 KCTD18Q6PI47 426 aaPredicted RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 SLC16A9Q7RTY1 509 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 ERI1Q8IV48 349 aaKnown RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 C8orf59Q8N0T1 100 aaPredicted RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 OR6N2Q8NGY6 317 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 RFKQ969G6 155 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 ERGIC1Q969X5 290 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 SPSB4Q96A44 273 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 OTULINQ96BN8 352 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 IL4I1Q96RQ9 567 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 SLC30A2Q9BRI3 323 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 MED20Q9H944 212 aa10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 H2AFY2Q9P0M6 372 aaPredicted RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 WARS2Q9UGM6 360 aaKnown RBP10.51□□□□□ -0.73
CLCNKA-205ENST00000477360 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 CCDC182A6NF36 153 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 M0R129 80 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 PHYHO14832 338 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 LILRA1O75019 489 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 NCR1O76036 304 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 MYF6P23409 242 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 HTR1FP30939 366 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 MAGEB1P43366 347 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 CCL8P80075 99 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 ROM1Q03395 351 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 EIF2B1Q14232 305 aaKnown RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF181Q2M3W8 571 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 KRTAP21-3Q3LHN1 58 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 TMEM255AQ5JRV8 349 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 CYB5R2Q6BCY4 276 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 LYPD4Q6UWN0 246 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 PGAP1Q75T13 922 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 MEPCEQ7L2J0 689 aaKnown RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 EGFL6Q8IUX8 553 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 SPERTQ8NA61 448 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 PLPP7Q8NBV4 271 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 BBS1Q8NFJ9 593 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 UBE2FQ969M7 185 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 ZMYND19Q96E35 227 aaPredicted RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 TIMD4Q96H15 378 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 Q96MT0 163 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 GSX1Q9H4S2 264 aaPredicted RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 CENPMQ9NSP4 180 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 MRPL15Q9P015 296 aaKnown RBP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 ABCA1O95477 2261 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 NAV3Q8IVL0 2385 aa10.5□□□□□ -0.73
CLCNKA-205ENST00000477360 IGHV4-61A0A0C4DH41 118 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 SNTNA6NMZ2 147 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 CLDN25C9JDP6 229 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 DENRO43583 198 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 SPRY3O43610 288 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 GMDSO60547 372 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 WBP4O75554 376 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 PTBP3O95758 552 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 GNAO1P09471 354 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 PSKH1P11801 424 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 COL8A2P25067 703 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 HSD11B1P28845 292 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 GATA4P43694 442 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 SLC6A9P48067 706 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 SRP9P49458 86 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 RPS7P62081 194 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 TNFAIP6P98066 277 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 IL5RAQ01344 420 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 MZT1Q08AG7 82 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 APOFQ13790 326 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 KLHL12Q53G59 568 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 C6orf52Q5T4I8 152 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 Q6ZR03 302 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 KRT74Q7RTS7 529 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 PRSS45Q7RTY3 260 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 MRPL21Q7Z2W9 205 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms