RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 GLYATL3Q5SZD4 288 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 LCN1P1Q5VSP4 162 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 DRAM2Q6UX65 266 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 USP51Q70EK9 711 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 PRSS45Q7RTY3 260 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 GALNT4Q8N4A0 578 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF283Q8N7M2 679 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 BHLHE23Q8NDY6 225 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 OR5L1Q8NGL2 311 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 SNX33Q8WV41 574 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 COG8Q96MW5 612 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF184Q99676 751 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 BPESC1Q9GZL8 116 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 BRD7Q9NPI1 651 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 TUBG2Q9NRH3 451 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 TREM2Q9NZC2 230 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 H2AFY2Q9P0M6 372 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 GPR160Q9UJ42 338 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ORC6Q9Y5N6 252 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 MAP1AP78559 2803 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 IGHV4-61A0A0C4DH41 118 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 LOC390937A0A1W2PQ73 354 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 PLSCR5A0PG75 271 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 TPD52L2O43399 206 aaKnown RBP8.23□□□□□ -1.09
HDAC3-208ENST00000476739 ENTPD6O75354 484 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 RP2O75695 350 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 HLA-DPB1P04440 258 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 H2BFMP0C1H6 154 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 GABRB1P18505 474 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 HSD11B1P28845 292 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 NR4A2P43354 598 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 SLC15A1P46059 708 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 CDC42P60953 191 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 CDK5R2Q13319 367 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 RIN1Q13671 783 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 TRIP10Q15642 601 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 MOGQ16653 247 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 FAM57BQ71RH2 274 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 SSX6Q7RTT6 188 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 SLC35F2Q8IXU6 374 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF454Q8N9F8 522 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 OR2Z1Q8NG97 314 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 OR51G2Q8NGK0 314 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 OR8J1Q8NGP2 316 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 SGK3Q96BR1 496 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 CNN2Q99439 309 aaKnown RBP8.23□□□□□ -1.09
HDAC3-208ENST00000476739 PIMREGQ9BSJ6 248 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 SOX7Q9BT81 388 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF275Q9NSD4 429 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-208ENST00000476739 FAM118AQ9NWS6 357 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 DCAF16Q9NXF7 216 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 NKIRAS2Q9NYR9 191 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 NKX1-2Q9UD57 310 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-208ENST00000476739 LAMP5Q9UJQ1 280 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 LRP12Q9Y561 859 aa8.23□□□□□ -1.09
HDAC3-208ENST00000476739 LRP5LA4QPB2 252 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 SLC22A31A6NKX4 558 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 IQCF6A8MYZ5 107 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 WNT9BO14905 357 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 MLNRO43193 412 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 TBX1O43435 398 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 MT-ND5P03915 603 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 ANXA2P07355 339 aaKnown RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 ADH4P08319 380 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 CSF3P09919 207 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 SBK2P0C263 348 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 SLC25A16P16260 332 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 SELEP16581 610 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 GIFP27352 417 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 HTR1FP30939 366 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 IL2RGP31785 369 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 LIPAP38571 399 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 CXCR4P61073 352 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 MALLQ13021 153 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 PCGF3Q3KNV8 242 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 CLEC9AQ6UXN8 241 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 PLEKHG7Q6ZR37 379 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 PGAP1Q75T13 922 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 RHOUQ7L0Q8 258 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 MRPL21Q7Z2W9 205 aaKnown RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 BIVMQ86UB2 503 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 GID4Q8IVV7 300 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 ENTHD1Q8IYW4 607 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 OR8G5Q8NG78 346 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 OR10AD1Q8NGE0 317 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 RDH5Q92781 318 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 DVL3Q92997 716 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 PPP1R14AQ96A00 147 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 OR8B4Q96RC9 309 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 TBX5Q99593 518 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 Q9H521 79 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 SAP30LQ9HAJ7 183 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 MYOZ1Q9NP98 299 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 CYSLTR2Q9NS75 346 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 DECR2Q9NUI1 292 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 SMPD3Q9NY59 655 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-208ENST00000476739 HAO2Q9NYQ3 351 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 WARS2Q9UGM6 360 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms