RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MEGF11A6BM72 1044 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 OOEPA6NGQ2 149 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 RNASEK-C17orf49H0YIS7 233 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 PIN1P1O15428 100 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 PTP4A3O75365 173 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 FSTL3O95633 263 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 LCATP04180 440 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 ZNF92Q03936 586 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 TRAP1Q12931 704 aaKnown RBP9.83□□□□□ -0.84
HDAC6-219ENST00000476625 SEC23BQ15437 767 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 KCNMB1Q16558 191 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 C2orf68Q2NKX9 166 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 OXLD1Q5BKU9 147 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 AGBL2Q5U5Z8 902 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 SLC18B1Q6NT16 456 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 C1orf122Q6ZSJ8 110 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 TMPRSS11FQ6ZWK6 438 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 OR8J3Q8NGG0 315 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 PPP1R35Q8TAP8 253 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 DYDC1Q8WWB3 177 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 RSRC1Q96IZ7 334 aaKnown RBP9.83□□□□□ -0.84
HDAC6-219ENST00000476625 MAGEB18Q96M61 343 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 CCL13Q99616 98 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 WACQ9BTA9 647 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 HDHD2Q9H0R4 259 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 PPA2Q9H2U2 334 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 NRIP3Q9NQ35 241 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 CMTM6Q9NX76 183 aa9.83□□□□□ -0.84
HDAC6-219ENST00000476625 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
HDAC6-219ENST00000476625 LOC100653049A0A140TA62 436 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 hCG_1807616A0A1W2PRN6 198 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 A6NLC8 198 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 KRT34O76011 436 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 DIRAS1O95057 198 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 IFNW1P05000 195 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 VIMP08670 466 aaKnown RBP9.82□□□□□ -0.84
HDAC6-219ENST00000476625 SLC2A1P11166 492 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 CPT2P23786 658 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 NPY4RP50391 375 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 BPIFB3P59826 476 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 GMFBP60983 142 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 KLF10Q13118 480 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 LY6EQ16553 131 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 GLYATL3Q5SZD4 288 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 ERICH5Q6P6B1 374 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 PGAP1Q75T13 922 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 OR6V1Q8N148 313 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 Q8N7P7 452 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 PNLDC1Q8NA58 520 aaKnown RBP9.82□□□□□ -0.84
HDAC6-219ENST00000476625 GJC3Q8NFK1 279 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 SLC26A10Q8NG04 563 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 OR2T12Q8NG77 320 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 SLC7A13Q8TCU3 470 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 SPRYD4Q8WW59 207 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-219ENST00000476625 ZNRF4Q8WWF5 429 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 RORBQ92753 470 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 MAP6Q96JE9 813 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 HSH2DQ96JZ2 352 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 NMNAT3Q96T66 252 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 PITX2Q99697 317 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 TMEM120AQ9BXJ8 343 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 FN3KRPQ9HA64 309 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 KIF17Q9P2E2 1029 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 RPUSD1Q9UJJ7 312 aaKnown RBP9.82□□□□□ -0.84
HDAC6-219ENST00000476625 VPREB3Q9UKI3 123 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 B9D1Q9UPM9 204 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 N6AMT1Q9Y5N5 214 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 DNAH3Q8TD57 4116 aa9.82□□□□□ -0.84
HDAC6-219ENST00000476625 TRBV4-1A0A0J9YWV2 114 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 CD300LBA8K4G0 201 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 J3QW42 95 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 NDUFB2O95178 105 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 IFNA14P01570 189 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 NCK1P16333 377 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 AMY2BP19961 511 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 MDH1P40925 334 aaKnown RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 OMPP47874 163 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 RPL15P61313 204 aaKnown RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 CSNK2BP67870 215 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 WDR38Q5JTN6 314 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 CD276Q5ZPR3 534 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 GDPGP1Q6ZNW5 385 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 MRPL21Q7Z2W9 205 aaKnown RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 C11orf53Q8IXP5 236 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 FAM156AQ8NDB6 213 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 OR4K13Q8NH42 304 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 MRAPQ8TCY5 172 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 TSPEARQ8WU66 669 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 ERMAPQ96PL5 475 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 ATF6BQ99941 703 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 RPRD1BQ9NQG5 326 aaKnown RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 MRPL22Q9NWU5 206 aaKnown RBP9.81□□□□□ -0.84
HDAC6-219ENST00000476625 ATPIF1Q9UII2 106 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 FAM96BQ9Y3D0 163 aa9.81□□□□□ -0.84
HDAC6-219ENST00000476625 TVP23AA6NH52 213 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 ACOT8O14734 319 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 NPFFO15130 113 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms