RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 KAAG1Q9UBP8 84 aa13.47□□□□□ -0.25
APOBEC3F-203ENST00000476513 DNAJB11Q9UBS4 358 aa13.47□□□□□ -0.25
APOBEC3F-203ENST00000476513 A0A1B0GW55 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 CDC42EP2O14613 210 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 PAHP00439 452 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 SAA4P35542 130 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DLX1P56177 255 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 MALLQ13021 153 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 KLRD1Q13241 179 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 ZBED5Q49AG3 693 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4L9Q6RFH8 374 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 PGAP1Q75T13 922 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 PNKDQ8N490 385 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 GCSAMQ8N6F7 178 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 ADAT1Q9BUB4 502 aaKnown RBP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 NUAK2Q9H093 628 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 NMNAT1Q9HAN9 279 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 VSX1Q9NZR4 365 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 RHCGQ9UBD6 479 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 DUX4Q9UBX2 424 aa13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 NOP16Q9Y3C1 178 aaKnown RBP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-203ENST00000476513 TENM3Q9P273 2699 aa13.46□□□□□ -0.26
APOBEC3F-203ENST00000476513 IGHV3OR15-7A0A075B7D8 119 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 GMDSO60547 372 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 IFNA14P01570 189 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 LCATP04180 440 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 IFNA8P32881 189 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 GPR4P46093 362 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 MAGOHP61326 146 aaKnown RBP13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 ELF3P78545 371 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 NSUN5P1Q3KNT7 163 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 RABL3Q5HYI8 236 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 TEX36Q5VZQ5 186 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 NANOGP8Q6NSW7 305 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 NAA40Q86UY6 237 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 CMTM4Q8IZR5 234 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 Q8N7P7 452 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 OR4S1Q8NGB4 309 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 OR4C13Q8NGP0 309 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 MMP28Q9H239 520 aa13.45□□□□□ -0.26
APOBEC3F-203ENST00000476513 DNAH3Q8TD57 4116 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 MEIOCA2RUB1 952 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 CD300LBA8K4G0 201 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 F5H5K5 113 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 H3BUX3 64 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 MPIG6BO95866 241 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 LHBP01229 141 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 GRPP07492 148 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 VSIG10L2P0DP72 767 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 SDHAP31040 664 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 TRAM2Q15035 370 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 TBPL2Q6SJ96 375 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 MRPL21Q7Z2W9 205 aaKnown RBP13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 OFCC1Q8IZS5 231 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 TNFRSF14Q92956 283 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 TPD52L3Q96J77 140 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 DMRTB1Q96MA1 342 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 TSSK2Q96PF2 358 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 CCL13Q99616 98 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 PARD6BQ9BYG5 372 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 AURKCQ9UQB9 309 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 MAB21L2Q9Y586 359 aa13.44□□□□□ -0.26
APOBEC3F-203ENST00000476513 A0A087WUU8 490 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 hCG_1807616A0A1W2PRN6 198 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 A6NLC8 198 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 J3KTA2 159 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 FFAR1O14842 300 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 CENPAP49450 140 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 LRRC23Q53EV4 343 aaPredicted RBP13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 GPR139Q6DWJ6 353 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 PGM2L1Q6PCE3 622 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 ZNF730Q6ZMV8 503 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 CFAP77Q6ZQR2 320 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 TMPRSS11FQ6ZWK6 438 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 RNF113BQ8IZP6 322 aaKnown RBP13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 BEND2Q8NDZ0 799 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 TSPEARQ8WU66 669 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 ACOT11Q8WXI4 607 aaPredicted RBP13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 FNDC11Q9BVV2 318 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 NRIP3Q9NQ35 241 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 SNX13Q9Y5W8 968 aa13.43□□□□□ -0.26
APOBEC3F-203ENST00000476513 DCTN6O00399 190 aa13.42□□□□□ -0.26
APOBEC3F-203ENST00000476513 SOCS2O14508 198 aa13.42□□□□□ -0.26
APOBEC3F-203ENST00000476513 PPP1R3DO95685 299 aa13.42□□□□□ -0.26
APOBEC3F-203ENST00000476513 MDH1P40925 334 aaKnown RBP13.42□□□□□ -0.26
APOBEC3F-203ENST00000476513 CDKN2AP42771 156 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms