RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
CPSF3-203ENST00000475482 FBXL14Q8N1E6 418 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 C12orf43Q96C57 262 aaKnown RBP13.51□□□□□ -0.25
CPSF3-203ENST00000475482 PELI1Q96FA3 418 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 ABHD6Q9BV23 337 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 KCNN2Q9H2S1 579 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 SIAEQ9HAT2 523 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 BARX1Q9HBU1 254 aaPredicted RBP13.51□□□□□ -0.25
CPSF3-203ENST00000475482 CYB5R1Q9UHQ9 305 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 STUB1Q9UNE7 303 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 UGT2A1Q9Y4X1 527 aa13.51□□□□□ -0.25
CPSF3-203ENST00000475482 A0A096LPE4 126 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 A0A1W2PPZ6 126 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 H3BMQ9 156 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 PLPP2O43688 288 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 GADD45AP24522 165 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 FABP6P51161 128 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 UBE2NP61088 152 aaKnown RBP13.5□□□□□ -0.25
CPSF3-203ENST00000475482 PCBD1P61457 104 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 AQP6Q13520 282 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 SSX1Q16384 188 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 SWI5Q1ZZU3 235 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 CEACAM16Q2WEN9 425 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 CNPY1Q3B7I2 92 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 FAM27BQ5VT28 67 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 SLC16A12Q6ZSM3 486 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 DCXRQ7Z4W1 244 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 RFLNBQ8N5W9 214 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 CACNG6Q9BXT2 260 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 REG4Q9BYZ8 158 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 TTTY10Q9BZA0 68 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 NIPAL2Q9H841 368 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 ATP23Q9Y6H3 246 aa13.5□□□□□ -0.25
CPSF3-203ENST00000475482 CHD3Q12873 2000 aaKnown RBP13.5□□□□□ -0.25
CPSF3-203ENST00000475482 ANK3Q12955 4377 aaKnown RBP13.5□□□□□ -0.25
CPSF3-203ENST00000475482 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 TRBV2A0A0J9YWF9 115 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF503-AS2A6NEH8 195 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 OGG1O15527 345 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 GPRIN2O60269 458 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 SERPINA3P01011 423 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 H2BFMP0C1H6 154 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 CECR9P0C854 216 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 CBR1P16152 277 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 CDAP32320 146 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 NAAAQ02083 359 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 SYT9Q86SS6 491 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 GJC3Q8NFK1 279 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 ST7LQ8TDW4 575 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 SMIM19Q96E16 107 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 FOXB1Q99853 325 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 NAA50Q9GZZ1 169 aaKnown RBP13.49□□□□□ -0.25
CPSF3-203ENST00000475482 ELOVL3Q9HB03 270 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 ACOXLQ9NUZ1 547 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 TMEM38BQ9NVV0 291 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 B3GNT2Q9NY97 397 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 PTTG2Q9NZH5 202 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
CPSF3-203ENST00000475482 KLHDC2Q9Y2U9 406 aa13.49□□□□□ -0.25
CPSF3-203ENST00000475482 A0A096LNT2 108 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 LOC100506127A0A0U1RQW1 187 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 RNF223E7ERA6 249 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 LALBAP00709 142 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 CST2P09228 141 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 OR8G3PP0DMU2 310 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 DCTDP32321 178 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 RPS27P42677 84 aaKnown RBP13.48□□□□□ -0.25
CPSF3-203ENST00000475482 TUBA1BP68363 451 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 CDK5R1Q15078 307 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 TAF13Q15543 124 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 CTF1Q16619 201 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF829Q3KNS6 432 aaPredicted RBP13.48□□□□□ -0.25
CPSF3-203ENST00000475482 LIPNQ5VXI9 398 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 DMKNQ6E0U4 476 aaPredicted RBP13.48□□□□□ -0.25
CPSF3-203ENST00000475482 ARL9Q6T311 187 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 TUBA1AQ71U36 451 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 THRSPQ92748 146 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 NABP1Q96AH0 204 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 SLAMF6Q96DU3 332 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF75AQ96N20 296 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF416Q9BWM5 594 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 EMC7Q9NPA0 242 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 EXOSC4Q9NPD3 245 aaKnown RBP13.48□□□□□ -0.25
CPSF3-203ENST00000475482 SLCO1C1Q9NYB5 712 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
CPSF3-203ENST00000475482 PNMA8CA0A1B0GUJ8 204 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 TRDV1A0A1B0GX56 115 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 ABHD16AO95870 558 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 CRYAAP02489 173 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 APOC1P02654 83 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 CALCRP30988 508 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms