RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MYOFQ9NZM1 2061 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 LRP5LA4QPB2 252 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 TMEM196Q5HYL7 178 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 OR2AK2Q8NG84 335 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 OR13C8Q8NGS7 320 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 RBPMSQ93062 196 aaKnown RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 ALKBH3Q96Q83 286 aaPredicted RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 S1PR5Q9H228 398 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 ZNF331Q9NQX6 463 aaPredicted RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 SLCO1C1Q9NYB5 712 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 CEACAM5P06731 702 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 NTF3P20783 257 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 CAPZBP47756 277 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 SLC6A12P48065 614 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 TMEM268Q5VZI3 342 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 DHRS4L2Q6PKH6 230 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 QPCTLQ9NXS2 382 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 OR5H15A6NDH6 313 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 OR5H1A6NKK0 313 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 GP2P55259 537 aaKnown RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 EGR3Q06889 387 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 SNTB1Q13884 538 aaKnown RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 PDCD1Q15116 288 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 TEX51A0A1B0GUA7 166 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 NCBP2LA6PVI3 153 aaKnown RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 MKRN2OSH3BPM6 223 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 SOX15O60248 233 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 GPX5O75715 221 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 PIAS2O75928 621 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 VAMP5O95183 116 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 ZNRF4Q8WWF5 429 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 A0A087WV62 115 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 FIGNL2A6NMB9 653 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 ADH4P08319 380 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 CMTM4Q8IZR5 234 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 KCNE4Q8WWG9 221 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 SARAFQ96BY9 339 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 GDF2Q9UK05 429 aaPredicted RBP9.93□□□□□ -0.82
VAPB-204ENST00000475243 ST3GAL6Q9Y274 331 aa9.93□□□□□ -0.82
VAPB-204ENST00000475243 CCR5P51681 352 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 PIGPP57054 158 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 FAM27D1Q5T7N8 215 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 LSRQ86X29 649 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 ESRP2Q9H6T0 727 aaKnown RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 RTTNQ86VV8 2226 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 A0A1W2PR80 420 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 TMEM129A0AVI4 362 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 ZAR1LA6NP61 321 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 LRP3O75074 770 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 RFX2P48378 723 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 SNRPNP63162 240 aaKnown RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 HLA-BQ31612 363 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 AVPI1Q5T686 147 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 HYAL3O43820 417 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 GPANK1O95872 356 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 IGLV3-27P01718 113 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 MT-ND4LP03901 98 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 FAM26EQ8N5C1 309 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 OR10Z1Q8NGY1 313 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 UBALD1Q8TB05 177 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 C2CD4CQ8TF44 421 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 FAM103A1Q9BTL3 118 aaKnown RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 PLEKHB1Q9UF11 243 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 ALS2Q96Q42 1657 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 SLC25A6P12236 298 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 MARCH1Q8TCQ1 289 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 GNRHR2Q96P88 292 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 ZNF416Q9BWM5 594 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 KCNIP2Q9NS61 270 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 WDR88Q6ZMY6 472 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 OR2Z1Q8NG97 314 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 APH1BQ8WW43 257 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 FAM122AQ96E09 287 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 FBXO17Q96EF6 278 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 S1PR3Q99500 378 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 ASIC5Q9NY37 505 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 ONECUT1Q9UBC0 465 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 R4GMQ9 66 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 CHEK1O14757 476 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 ZNF354AO60765 605 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 ITGBL1O95965 494 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 CTXN2P0C2S0 81 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 DIO1P49895 249 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 OTUD1Q5VV17 481 aaPredicted RBP9.92□□□□□ -0.82
VAPB-204ENST00000475243 CD276Q5ZPR3 534 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 H3F3CQ6NXT2 135 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 LINC01465Q8N7H1 131 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 TGIF2Q9GZN2 237 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 TXNIPQ9H3M7 391 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 SPACA1Q9HBV2 294 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 A0A087WZY1 265 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 CT45A10P0DMU9 189 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 SHBQ15464 509 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 CYHR1Q6ZMK1 362 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 GABRG1Q8N1C3 465 aa9.92□□□□□ -0.82
VAPB-204ENST00000475243 KISS1RQ969F8 398 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms