RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SEC11CQ9BY50 192 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PLK3Q9H4B4 646 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HES2Q9Y543 173 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ARL5AQ9Y689 179 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 NYNRINQ9P2P1 1898 aaKnown RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SMIM28A0A1B0GU29 152 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OOEPA6NGQ2 149 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 IDSB3KWA1 339 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM50AO95807 157 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 MTHFD2P13995 350 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 S100A3P33764 101 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF121P58317 390 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SPIN3Q5JUX0 258 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 RTL6Q6ICC9 239 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 LGI3Q8N145 548 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ZFP41Q8N8Y5 198 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 AMER3Q8N944 861 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ACOT4Q8N9L9 421 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR6N1Q8NGY5 312 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR2T27Q8NH04 317 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 MCFD2Q8NI22 146 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 NFKBIDQ8NI38 313 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 GLYATL1Q969I3 302 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ST6GALNAC6Q969X2 333 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 LOXL4Q96JB6 756 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 MBOAT4Q96T53 435 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF670Q9BS34 389 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 TMPRSS13Q9BYE2 586 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 PBX4Q9BYU1 374 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 FN3KQ9H479 309 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 GPR35Q9HC97 309 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 B3GAT2Q9NPZ5 323 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SLC17A5Q9NRA2 495 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ERG28Q9UKR5 140 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 FAM96BQ9Y3D0 163 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 PTPRZ1P23471 2315 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 A0A087WUU8 490 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 A0A0J9YY10 115 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 A0A1B0GX78 115 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 C21orf140B9A014 251 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CPSF4O95639 269 aaKnown RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 FABP3P05413 133 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 WNT2P09544 360 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR5H8P0DN80 308 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 LMO1P25800 156 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CCKBRP32239 447 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 BSGP35613 385 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ACVR1BP36896 505 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CTSKP43235 329 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 PTPRNQ16849 979 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 MST1LQ2TV78 715 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CPTPQ5TA50 214 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 C9orf57Q5W0N0 161 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 BICRALQ6AI39 1079 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 GSG1LQ6UXU4 331 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 C6orf120Q7Z4R8 191 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SYT12Q8IV01 421 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 Q8N402 240 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 JAGN1Q8N5M9 183 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR9G4Q8NGQ1 327 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 FNDC9Q8TBE3 224 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 PNPLA2Q96AD5 504 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM125Q96AQ2 219 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 C1orf159Q96HA4 380 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF75AQ96N20 296 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 MRPL45Q9BRJ2 306 aaKnown RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ABHD6Q9BV23 337 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SCRT1Q9BWW7 348 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF319Q9P2F9 582 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 YIPF1Q9Y548 306 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR5H15A6NDH6 313 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR5H1A6NKK0 313 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 RFXANKO14593 260 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 RAB38P57729 211 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 NKX6-1P78426 367 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ACKR1Q16570 336 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 ACSM3Q53FZ2 586 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 OR2G6Q5TZ20 316 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CST9LP1Q5W188 147 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 AWAT2Q6E213 333 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 UFSP1Q6NVU6 142 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 NCEH1Q6PIU2 408 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM91Q6ZNR0 172 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 DOLPP1Q86YN1 238 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 NUP43Q8NFH3 380 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SNIP1Q8TAD8 396 aaKnown RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 MCHR2Q969V1 340 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CMBLQ96DG6 245 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SPATA25Q9BR10 227 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 TAPBPLQ9BX59 468 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SIRPDQ9H106 197 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 SAMD4AQ9UPU9 718 aaKnown RBP4.32□□□□□ -1.72
NPHP3-206ENST00000474871 NME7Q9Y5B8 376 aa4.32□□□□□ -1.72
NPHP3-206ENST00000474871 CITO14578 2027 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 LOC102724200A0A096LPH7 203 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OR2M5A3KFT3 312 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 G3V2L1 256 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 PIRO00625 290 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF207O43670 478 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 AIFM1O95831 613 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms