RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CACNG2Q9Y698 323 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 ZSCAN5BA6NJL1 495 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 F5H5K5 113 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 ZNF593O00488 134 aaPredicted RBP12.83□□□□□ -0.36
VARS-223ENST00000474643 GLCEO94923 617 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 NGFP01138 241 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 TNFRSF1AP19438 455 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 GGT2P36268 569 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 HSPA13P48723 471 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 RGS6P49758 472 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 LMO4P61968 165 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 HIST1H3AP68431 136 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 ECH1Q13011 328 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 HIST2H3PS2Q5TEC6 136 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 HIST2H3AQ71DI3 136 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 DCXRQ7Z4W1 244 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 OR2Z1Q8NG97 314 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 OR5L1Q8NGL2 311 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 SPTSSAQ969W0 71 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 ZMYND19Q96E35 227 aaPredicted RBP12.83□□□□□ -0.36
VARS-223ENST00000474643 INTS14Q96SY0 518 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 HCAR1Q9BXC0 346 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 TBCCD1Q9NVR7 557 aa12.83□□□□□ -0.36
VARS-223ENST00000474643 H2AFY2Q9P0M6 372 aaPredicted RBP12.83□□□□□ -0.36
VARS-223ENST00000474643 A0A0A6YYJ9 748 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 ZAR1LA6NP61 321 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 SLC16A6O15403 523 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 PLPP2O43688 288 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 IGHV2-5P01817 119 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 EPHA1P21709 976 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 TUBG1P23258 451 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 SLC6A9P48067 706 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 MMP15P51511 669 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 TPTEP56180 551 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 EIF2B1Q14232 305 aaKnown RBP12.82□□□□□ -0.36
VARS-223ENST00000474643 LPCAT4Q643R3 524 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 SPATC1Q76KD6 591 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 BPIFB2Q8N4F0 458 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 KLHL36Q8N4N3 616 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 PTP4A1Q93096 173 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 HRASLS5Q96KN8 279 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 JMJD8Q96S16 334 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 COPS4Q9BT78 406 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 PTTG3PQ9NZH4 202 aa12.82□□□□□ -0.36
VARS-223ENST00000474643 LOC105371242A0A075B767 164 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 H0YAE9 185 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 J3QLI3 93 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 PRODHO43272 600 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 LCATP04180 440 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 SBK2P0C263 348 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 GATA3P23771 443 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 VHLP40337 213 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 LCN2P80188 198 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 APOFQ13790 326 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 SLC35D3Q5M8T2 416 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 LINC01590Q5TEZ4 76 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 LCN1P1Q5VSP4 162 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 SLX4IPQ5VYV7 408 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 SHFQ7M4L6 423 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 DPY19L4Q7Z388 723 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 SPICQ8N5J4 248 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 TCEANCQ8N8B7 351 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 NANPQ8TBE9 248 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 NRG4Q8WWG1 115 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 TRUB1Q8WWH5 349 aaKnown RBP12.81□□□□□ -0.36
VARS-223ENST00000474643 APOBEC3DQ96AK3 386 aaPredicted RBP12.81□□□□□ -0.36
VARS-223ENST00000474643 SLAMF6Q96DU3 332 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 MAP6Q96JE9 813 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 STARD10Q9Y365 291 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 N6AMT1Q9Y5N5 214 aa12.81□□□□□ -0.36
VARS-223ENST00000474643 ZNF878C9JN71 531 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 DLGAP1O14490 977 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 ICMTO60725 284 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 HSD11B1P28845 292 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 MALLQ13021 153 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 PSG7Q13046 419 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 IL18R1Q13478 541 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 SNCBQ16143 134 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 LRRC36Q1X8D7 754 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 TEX30Q5JUR7 227 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 TTC23Q5W5X9 447 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 BBS1Q8NFJ9 593 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 THEM6Q8WUY1 208 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 CMBLQ96DG6 245 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 SUCNR1Q9BXA5 334 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 C7orf69Q9H7B7 122 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 PURGQ9UJV8 347 aaKnown RBP12.8□□□□□ -0.36
VARS-223ENST00000474643 PPP1R3CQ9UQK1 317 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 NPTNQ9Y639 398 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 ANK2Q01484 3957 aa12.8□□□□□ -0.36
VARS-223ENST00000474643 TRIM77I1YAP6 450 aa12.79□□□□□ -0.36
VARS-223ENST00000474643 J3QW42 95 aa12.79□□□□□ -0.36
VARS-223ENST00000474643 M0R129 80 aa12.79□□□□□ -0.36
VARS-223ENST00000474643 M0R135 149 aa12.79□□□□□ -0.36
VARS-223ENST00000474643 PRKYO43930 277 aa12.79□□□□□ -0.36
VARS-223ENST00000474643 SELENOFO60613 162 aa12.79□□□□□ -0.36
VARS-223ENST00000474643 FOXH1O75593 365 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms