RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 NRBF2Q96F24 287 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 GGTLC1Q9BX51 225 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 CALN1Q9BXU9 219 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 CLSTN2Q9H4D0 955 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 ZSCAN16Q9H4T2 348 aaPredicted RBP1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 ZNF160Q9HCG1 818 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 CLN6Q9NWW5 311 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 NMRK1Q9NWW6 199 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 SLC39A1Q9NY26 324 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 HES2Q9Y543 173 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 CAMTA1Q9Y6Y1 1673 aa1.63□□□□□ -2.15
ECHDC1-213ENST00000474240 C5orf63A6NC05 138 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 GOLGA6L4A6NEF3 574 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 NCBP2LA6PVI3 153 aaKnown RBP1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 K7EMT4 169 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 OR2F2O95006 317 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 SNX4O95219 450 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 IGKV1D-16P01601 117 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 IGLV3-25P01717 112 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 RAB4AP20338 218 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 UQCRFS1P47985 274 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 IDH2P48735 452 aaKnown RBP1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 RAB7AP51149 207 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 LIPEQ05469 1076 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 CYP24A1Q07973 514 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 SIGLEC14Q08ET2 396 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 SELENBP1Q13228 472 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 SRSF5Q13243 272 aaKnown RBP1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 CHRNA6Q15825 494 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 LRRC66Q68CR7 880 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 NT5DC3Q86UY8 548 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 ZFP41Q8N8Y5 198 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 BPIFCQ8NFQ6 507 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 ENKURQ8TC29 256 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 N4BP2L2Q92802 583 aaPredicted RBP1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 PRRC1Q96M27 445 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 TEAD3Q99594 435 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 GPR21Q99679 349 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 ACTR3CQ9C0K3 210 aaPredicted RBP1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 WFDC1Q9HC57 220 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 UBIAD1Q9Y5Z9 338 aa1.62□□□□□ -2.15
ECHDC1-213ENST00000474240 NINLQ9Y2I6 1382 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 KIR2DS1A0A191URI9 304 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 KBTBD11-OT1A0A1B0GTJ5 212 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 CENPBD1B2RD01 187 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 M0R3G1 203 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 MT-ND4P03905 459 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 ASGR1P07306 291 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 CD34P28906 385 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 PBLDP30039 288 aaPredicted RBP1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 OR1E1P30953 314 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 TGFBR1P36897 503 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 MERTKQ12866 999 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 DMC1Q14565 340 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 NCF4Q15080 339 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 PRSS54Q6PEW0 395 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 EIF3MQ7L2H7 374 aaKnown RBP1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 C1orf64Q8NEQ6 169 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 OR5T1Q8NG75 326 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 ZNF317Q96PQ6 595 aaPredicted RBP1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 CDX2Q99626 313 aaPredicted RBP1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 SAMD10Q9BYL1 202 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 PIGUQ9H490 435 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 TMEM38AQ9H6F2 299 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 TMEM185BQ9H7F4 350 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 CSNK1G1Q9HCP0 422 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 CLN8Q9UBY8 286 aa1.61□□□□□ -2.15
ECHDC1-213ENST00000474240 A0A075B6Q4 140 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 IGKV1-8A0A0C4DH67 115 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 A0A1B0GW55 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 PLPP1O14494 284 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DNALI1O14645 258 aaPredicted RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 LHBP01229 141 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 RPN2P04844 631 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DUX4L2P0CJ85 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DUX4L3P0CJ86 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DUX4L5P0CJ88 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DUX4L6P0CJ89 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DUX4L7P0CJ90 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 BCKDHBP21953 392 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 STOMP27105 288 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 GALR1P47211 349 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 AP1S2P56377 157 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 RPS11P62280 158 aaKnown RBP eCLIP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 RPS15P62841 145 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 BTN1A1Q13410 526 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 TFDP2Q14188 446 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 RBMY1FQ15415 496 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 MRPL23Q16540 153 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 TAF9Q16594 264 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 BEX5Q5H9J7 111 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 CCDC183Q5T5S1 534 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 RWDD4Q6NW29 188 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 CD300LGQ6UXG3 332 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 ANGPTL8Q6UXH0 198 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 ZYG11AQ6WRX3 759 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 BRD3OSQ6XYD6 125 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 C16orf47Q6ZP98 133 aaPredicted RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 HORMAD1Q86X24 394 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 CBLN2Q8IUK8 224 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms