RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 RNF133Q8WVZ7 376 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 OR2V2Q96R30 315 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 IL4I1Q96RQ9 567 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 PPP1R3CQ9UQK1 317 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 XRCC2O43543 280 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 CRLF1O75462 422 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 MRPL3P09001 348 aaKnown RBP12.05□□□□□ -0.48
VAMP4-203ENST00000474047 SLC2A5P22732 501 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 EPHA2P29317 976 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 IL2RGP31785 369 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 CDH15P55291 814 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 ZNF92Q03936 586 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 GLYATL3Q5SZD4 288 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 FAM57BQ71RH2 274 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 KRT77Q7Z794 578 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 TMEM163Q8TC26 289 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 SLC30A2Q9BRI3 323 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 YIPF3Q9GZM5 350 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 TMEFF2Q9UIK5 374 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-203ENST00000474047 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
VAMP4-203ENST00000474047 WIPI2Q9Y4P8 454 aa12.05□□□□□ -0.48
VAMP4-203ENST00000474047 M0R129 80 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 OR8G1Q15617 311 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 CHRFAM7AQ494W8 412 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 SPRNQ5BIV9 151 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 C12orf73Q69YU5 71 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 KCTD18Q6PI47 426 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-203ENST00000474047 MEPCEQ7L2J0 689 aaKnown RBP12.04□□□□□ -0.48
VAMP4-203ENST00000474047 OR52H1Q8NGJ2 320 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 STMN2Q93045 179 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 PGAM5Q96HS1 289 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 AMELYQ99218 206 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 BEX2Q9BXY8 128 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 SHARPINQ9H0F6 387 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 OR10A2Q9H208 303 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 OPA3Q9H6K4 179 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-203ENST00000474047 TMEM14AQ9Y6G1 99 aa12.04□□□□□ -0.48
VAMP4-203ENST00000474047 NIPBLQ6KC79 2804 aaeCLIP12.04□□□□□ -0.48
VAMP4-203ENST00000474047 SLC22A31A6NKX4 558 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 CD300LBA8K4G0 201 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 B4DSR2 109 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 F5H5P2 479 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 H0YL77 283 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 H3BNX3 289 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 WNT9BO14905 357 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 HLA-DPB1P04440 258 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 SBK2P0C263 348 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 ANPEPP15144 967 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 OPRL1P41146 370 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 HCCSP53701 268 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 ZNF121P58317 390 aaPredicted RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 NXNL2Q5VZ03 156 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 BCDIN3DQ7Z5W3 292 aaKnown RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 GID4Q8IVV7 300 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 RAB39BQ96DA2 213 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 CNN2Q99439 309 aaKnown RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 GAL3ST1Q99999 423 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 SOX7Q9BT81 388 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 SLC22A4Q9H015 551 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 NIPAL2Q9H841 368 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 S100A14Q9HCY8 104 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 PCDHB10Q9UN67 800 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 DYSFO75923 2080 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 IGHV3-64DA0A0J9YX35 117 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 IFNL4K9M1U5 179 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 BAG2O95816 211 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 HNF1AP20823 631 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 CA6P23280 308 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 CFL1P23528 166 aaKnown RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
VAMP4-203ENST00000474047 CDC42P60953 191 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 LRRN1Q6UXK5 716 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 REEP6Q96HR9 211 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 MEGF10Q96KG7 1140 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 GABARAPL3Q9BY60 117 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 MROQ9BYG7 248 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 IMPAD1Q9NX62 359 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 UBAP1Q9NZ09 502 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 CDC42EP3Q9UKI2 254 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 NPTNQ9Y639 398 aa12.03□□□□□ -0.48
VAMP4-203ENST00000474047 NSD1Q96L73 2696 aaPredicted RBP12.02□□□□□ -0.48
VAMP4-203ENST00000474047 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.48
VAMP4-203ENST00000474047 C5orf63A6NC05 138 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 CCDC182A6NF36 153 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 LRRC30A6NM36 301 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 ANKRD30BLA7E2S9 258 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 EI24O14681 340 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 MLNRO43193 412 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 IRF2P14316 349 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 ALOX5APP20292 161 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 ATP6V1E1P36543 226 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 ASB17Q8WXJ9 295 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 C9orf16Q9BUW7 83 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms