RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 OR6C68A6NDL8 312 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 CD300LBA8K4G0 201 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 M0R135 149 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 LGALS8O00214 317 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 OR10H3O60404 316 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 NDUFA7O95182 113 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 HLA-DPB1P04440 258 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 FABP3P05413 133 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 ZNF823P16415 610 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 SF3A3Q12874 501 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHD3-209ENST00000473376 OR8G1Q15617 311 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 TEX30Q5JUR7 227 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 SAMD4BQ5PRF9 694 aaKnown RBP11.27□□□□□ -0.61
CHD3-209ENST00000473376 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
CHD3-209ENST00000473376 FAM86B1Q8N7N1 296 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 PNLDC1Q8NA58 520 aaKnown RBP11.27□□□□□ -0.61
CHD3-209ENST00000473376 BHLHE23Q8NDY6 225 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 OR2T4Q8NH00 348 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 SLCO4A1Q96BD0 722 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 TMIGD2Q96BF3 282 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 ZNF799Q96GE5 643 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 MAP6Q96JE9 813 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 TRIM15Q9C019 465 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 MRPL22Q9NWU5 206 aaKnown RBP11.27□□□□□ -0.61
CHD3-209ENST00000473376 ADA2Q9NZK5 511 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 KAAG1Q9UBP8 84 aa11.27□□□□□ -0.61
CHD3-209ENST00000473376 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 ZNF879B4DU55 563 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 GPR37O15354 613 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 FAM20BO75063 409 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 GPANK1O95872 356 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 HLA-DQA2P01906 255 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 SPIBQ01892 262 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHD3-209ENST00000473376 PDCD1Q15116 288 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 OTPQ5XKR4 325 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 PGAM4Q8N0Y7 254 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 OR52L1Q8NGH7 329 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 OR4F5Q8NH21 305 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 SP140LQ9H930 580 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 BEX1Q9HBH7 125 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 C14orf119Q9NWQ9 140 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 ZNF446Q9NWS9 450 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 NDE1Q9NXR1 346 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 BAIAP2Q9UQB8 552 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 CDH10Q9Y6N8 788 aa11.26□□□□□ -0.61
CHD3-209ENST00000473376 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.25□□□□□ -0.61
CHD3-209ENST00000473376 BHLHE40O14503 412 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 XRCC2O43543 280 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 DIRAS1O95057 198 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 ZNF205O95201 554 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 LHBP01229 141 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 APOC1P02654 83 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 MMP9P14780 707 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 CFHR2P36980 270 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 FGF12P61328 243 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 HNRNPA0Q13151 305 aaKnown RBP11.25□□□□□ -0.61
CHD3-209ENST00000473376 MPPED2Q15777 294 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 SNCBQ16143 134 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 TEX36Q5VZQ5 186 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 PGBD2Q6P3X8 592 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 NAA40Q86UY6 237 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 LINC00346Q8IVM7 164 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 LNX2Q8N448 690 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 SSMEM1Q8WWF3 244 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 ITFG2Q969R8 447 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 NSMCE2Q96MF7 247 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 DUX5Q96PT3 197 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 KCNJ15Q99712 375 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 WDR76Q9H967 626 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 RNPEPL1Q9HAU8 725 aa11.25□□□□□ -0.61
CHD3-209ENST00000473376 DOCK11Q5JSL3 2073 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 OOEPA6NGQ2 149 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 C22orf46C9J442 243 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 HOXA3O43365 443 aaPredicted RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 TIPRLO75663 272 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 TOX4O94842 621 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 CRYBA1P05813 215 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 MUC1P15941 1255 aaPredicted RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 CA6P23280 308 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 CFL1P23528 166 aaKnown RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 RRM2P31350 389 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 GRK5P34947 590 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 SLC15A1P46059 708 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 SLC25A1P53007 311 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 ZNF92Q03936 586 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 GK3PQ14409 553 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 METAP1DQ6UB28 335 aaPredicted RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 LYPD2Q6UXB3 125 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 RASSF6Q6ZTQ3 369 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.24□□□□□ -0.61
CHD3-209ENST00000473376 SDR9C7Q8NEX9 313 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 TBC1D15Q8TC07 691 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 NPRL2Q8WTW4 380 aa11.24□□□□□ -0.61
CHD3-209ENST00000473376 GATAD2BQ8WXI9 593 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms