RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 UFD1Q92890 307 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 DACT3Q96B18 629 aaPredicted RBP5.9□□□□□ -1.46
CKS1B-205ENST00000473344 LRRC58Q96CX6 371 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 SLC47A1Q96FL8 570 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 ITCHQ96J02 903 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 WDFY2Q96P53 400 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 GAL3ST1Q99999 423 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 SPATA5L1Q9BVQ7 753 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 OR51B6Q9H340 312 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 C1orf198Q9H425 327 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 TOR3AQ9H497 397 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 SAP30LQ9HAJ7 183 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 TMEM27Q9HBJ8 222 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 CDH20Q9HBT6 801 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 CCDC167Q9P0B6 97 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 SLC13A4Q9UKG4 626 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 CHST2Q9Y4C5 530 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 PPIAL4AQ9Y536 164 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 GPR45Q9Y5Y3 372 aa5.9□□□□□ -1.46
CKS1B-205ENST00000473344 ARFGEF3Q5TH69 2177 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 IQCMA0A1B0GVH7 501 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 LINC00854A0A1B0GVQ3 168 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 A0A1B0GWA3 101 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PLSCR5A0PG75 271 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 C11orf98E9PRG8 122 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 I3L521 148 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 GSTA4O15217 222 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 RGS5O15539 181 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 SLC22A5O76082 557 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 IGHV2-5P01817 119 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 APOC1P02654 83 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PATE4P0C8F1 98 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ADORA3P0DMS8 318 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 OR8G3PP0DMU2 310 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 HKR1P10072 659 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 CCL2P13500 99 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 CCNOP22674 350 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 MYL9P24844 172 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 HOXA1P49639 335 aaPredicted RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 GBX2P52951 348 aaPredicted RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 BIDP55957 195 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 VBP1P61758 197 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 SLC35A2P78381 396 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 LCN2P80188 198 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PLP2Q04941 152 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 NFYCQ13952 458 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 GRK1Q15835 563 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 SLC36A2Q495M3 483 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PDLIM3Q53GG5 364 aaPredicted RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 METAP1DQ6UB28 335 aaPredicted RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 TMPRSS11AQ6ZMR5 421 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PXKQ7Z7A4 578 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF584Q8IVC4 421 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 SKA3Q8IX90 412 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 RDH10Q8IZV5 341 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 SLC22A24Q8N4F4 322 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ZDHHC22Q8N966 263 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 FAM156AQ8NDB6 213 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 OR9Q1Q8NGQ5 310 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 OR1J2Q8NGS2 313 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 OR6S1Q8NH40 331 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF519Q8TB69 540 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 NDNFQ8TB73 568 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 AP3S1Q92572 193 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 CCL17Q92583 94 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 MAL2Q969L2 176 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ELMOD3Q96FG2 381 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 HSH2DQ96JZ2 352 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF75AQ96N20 296 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 TSPAN32Q96QS1 320 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 BCL2L14Q9BZR8 327 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 GABARAPL1Q9H0R8 117 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 GORASP2Q9H8Y8 452 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 BCL2L10Q9HD36 194 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 A4GALTQ9NPC4 353 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ESM1Q9NQ30 184 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 POLE4Q9NR33 117 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PCDHB16Q9NRJ7 776 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 SLC6A13Q9NSD5 602 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 MED9Q9NWA0 146 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 NKIRAS2Q9NYR9 191 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF224Q9NZL3 707 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 TESQ9UGI8 421 aaKnown RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 UBQLN2Q9UHD9 624 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 KIF25Q9UIL4 384 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 BAIAP2Q9UQB8 552 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 PRELID3BQ9Y3B1 194 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 WIPI2Q9Y4P8 454 aa5.89□□□□□ -1.47
CKS1B-205ENST00000473344 HEATR1Q9H583 2144 aaKnown RBP5.89□□□□□ -1.47
CKS1B-205ENST00000473344 IGKV1D-42A0A075B6H8 117 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 IGLV3-9A0A075B6K5 115 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 TCRBV5S2A0A599 114 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 PTGES3LE9PB15 166 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 CLIC1O00299 241 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 NME4O00746 187 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 PLPP3O14495 311 aa5.88□□□□□ -1.47
CKS1B-205ENST00000473344 PAX4O43316 350 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms