RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PSMB6P28072 239 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PNLIPRP2P54317 469 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 FOXK1P85037 733 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 GUCA2BQ16661 112 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 C17orf82Q86X59 251 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PUSL1Q8N0Z8 303 aaKnown RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 OR1M1Q8NGA1 313 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 OR4K17Q8NGC6 315 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PAQR8Q8TEZ7 354 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 DCUN1D4Q92564 292 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PIK3IP1Q96FE7 263 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 ADAT1Q9BUB4 502 aaKnown RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PRELID3BQ9Y3B1 194 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 RAB19A4D1S5 217 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 SIGLEC6O43699 453 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 SSX5O60225 188 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 DUS4LO95620 317 aaKnown RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 TTRP02766 147 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 ADCYAP1P18509 176 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 HSD11B1P28845 292 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 CSNK1EP49674 416 aaKnown RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 HSD11B2P80365 405 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 TDGQ13569 410 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PCK2Q16822 640 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 C14orf28Q4W4Y0 310 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 PTCRAQ6ISU1 281 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 FAHD2BQ6P2I3 314 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 DNM1P34Q6PK57 102 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 TMPPEQ6ZT21 453 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 LINC00518Q8N0U6 118 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 GTPBP8Q8N3Z3 284 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-207ENST00000473212 SLC22A24Q8N4F4 322 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 OR13C9Q8NGT0 318 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 OR2I1PQ8NGU4 316 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 FAHD2AQ96GK7 314 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 NICN1Q9BSH3 213 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 FAM206AQ9NX38 181 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 RALGAPA1Q6GYQ0 2036 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 A6NIZ1 184 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 SYT7O43581 403 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 BPNT1O95861 308 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 RAP1BP61224 184 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 RAP1AP62834 184 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 FLI1Q01543 452 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-207ENST00000473212 RNF133Q8WVZ7 376 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 SLC2A1P11166 492 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 MMP16P51512 607 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 FAM219AQ8IW50 185 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 KCNK17Q96T54 332 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 SLC22A11Q9NSA0 550 aa18.75■□□□□ 0.59
COL18A1-207ENST00000473212 IGHV1OR21-1A0A087WYE8 117 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 ZNF217O75362 1048 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 CCDC157Q569K6 752 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 AWAT2Q6E213 333 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 DEGS2Q6QHC5 323 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 COX15Q7KZN9 410 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 ANGPTL5Q86XS5 388 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 LDLRAD3Q86YD5 345 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 OR10S1Q8NGN2 331 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 OR10R2Q8NGX6 335 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 SLAMF6Q96DU3 332 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 UCK1Q9HA47 277 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 A0A0B4J2A0 478 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 DBX1A6NMT0 343 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 FGF16O43320 207 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 ACTL6AO96019 429 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 RNF4P78317 190 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 SRSF3P84103 164 aaKnown RBP18.74■□□□□ 0.59
COL18A1-207ENST00000473212 TMEM71Q6P5X7 295 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 OR4K15Q8NH41 348 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 ROBO4Q8WZ75 1007 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 PBOV1Q9GZY1 135 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 SHPKQ9UHJ6 478 aa18.74■□□□□ 0.59
COL18A1-207ENST00000473212 COL5A1P20908 1838 aaPredicted RBP18.74■□□□□ 0.59
COL18A1-207ENST00000473212 EFNA2O43921 213 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 ARMC10Q8N2F6 343 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 SVBPQ8N300 66 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 DTWD2Q8NBA8 298 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 ELP5Q8TE02 316 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 C11orf40Q8WZ69 217 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 RRNAD1Q96FB5 475 aaKnown RBP18.73■□□□□ 0.59
COL18A1-207ENST00000473212 RNF126Q9BV68 326 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 OR6C76A6NM76 312 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 LMO7DNF2Z398 122 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 TPT1P13693 172 aaKnown RBP18.73■□□□□ 0.59
COL18A1-207ENST00000473212 CD27P26842 260 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 DAP3P51398 398 aaKnown RBP18.73■□□□□ 0.59
COL18A1-207ENST00000473212 CLDN6P56747 220 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 TLE3Q04726 772 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 FOXF1Q12946 379 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 KLHL24Q6TFL4 600 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 ZNF101Q8IZC7 436 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 SLC38A9Q8NBW4 561 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 STOML3Q8TAV4 291 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 UQCC2Q9BRT2 126 aa18.73■□□□□ 0.59
COL18A1-207ENST00000473212 TEX13DA0A0J9YY54 714 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-207ENST00000473212 F8VVB4 439 aa18.72■□□□□ 0.59
COL18A1-207ENST00000473212 F8VWA3 439 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms