RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
TPM3-216ENST00000473036 SLC2A1P11166 492 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 GABRB1P18505 474 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 ALOX5APP20292 161 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 OPRL1P41146 370 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 PRKXP51817 358 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 RPS7P62081 194 aaKnown RBP11.17□□□□□ -0.62
TPM3-216ENST00000473036 ECH1Q13011 328 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 GGTLC2Q14390 218 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 ZNF718Q3SXZ3 478 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 MAPK1IP1LQ8NDC0 245 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 ZNF582Q96NG8 517 aaPredicted RBP11.17□□□□□ -0.62
TPM3-216ENST00000473036 ADGRL4Q9HBW9 690 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 CENPMQ9NSP4 180 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 MRPS18AQ9NVS2 196 aaKnown RBP11.17□□□□□ -0.62
TPM3-216ENST00000473036 DNAJC27Q9NZQ0 273 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 MYRFQ9Y2G1 1151 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 C17orf100A8MU93 164 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 VSTM5A8MXK1 200 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 M0R135 149 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 MAGEB4O15481 346 aaPredicted RBP11.16□□□□□ -0.62
TPM3-216ENST00000473036 ENTPD6O75354 484 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 TNFAIP8O95379 198 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 CLIC3O95833 236 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 PIPP12273 146 aaPredicted RBP11.16□□□□□ -0.62
TPM3-216ENST00000473036 KITLGP21583 273 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 COL8A2P25067 703 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 NUDT6P53370 316 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 ACTC1P68032 377 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 ACTA1P68133 377 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 SLC16A9Q7RTY1 509 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 OR2AE1Q8NHA4 323 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 C10orf105Q8TEF2 133 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 YIPF5Q969M3 257 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
TPM3-216ENST00000473036 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 ZNF799Q96GE5 643 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 KCNJ15Q99712 375 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 MSL2Q9HCI7 577 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 DYNLRB1Q9NP97 96 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 INPP5EQ9NRR6 644 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 CHCHD3Q9NX63 227 aaKnown RBP11.16□□□□□ -0.62
TPM3-216ENST00000473036 PURGQ9UJV8 347 aaKnown RBP11.16□□□□□ -0.62
TPM3-216ENST00000473036 ABCA1O95477 2261 aa11.16□□□□□ -0.62
TPM3-216ENST00000473036 VWC2LB2RUY7 222 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 ZNF878C9JN71 531 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 RNF223E7ERA6 249 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 H3BSA7 217 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 PSMD9O00233 223 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 PHYHO14832 338 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 WBP4O75554 376 aaKnown RBP11.15□□□□□ -0.62
TPM3-216ENST00000473036 APOL3O95236 402 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 IGHV1-46P01743 117 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 LCATP04180 440 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 BMP4P12644 408 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 DCKP27707 260 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 CHN2P52757 468 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 GABARAPL2P60520 117 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 ZNF92Q03936 586 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 KRTAP1-1Q07627 177 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.62
TPM3-216ENST00000473036 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 GLYATL3Q5SZD4 288 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 ARL9Q6T311 187 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 LRRN1Q6UXK5 716 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 SSX6Q7RTT6 188 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 ZNF540Q8NDQ6 660 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 THEM6Q8WUY1 208 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 COPS4Q9BT78 406 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 TTTY10Q9BZA0 68 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 RAB1BQ9H0U4 201 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 BARX1Q9HBU1 254 aaPredicted RBP11.15□□□□□ -0.62
TPM3-216ENST00000473036 SLCO1C1Q9NYB5 712 aa11.15□□□□□ -0.62
TPM3-216ENST00000473036 TANC2Q9HCD6 1990 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 SONP18583 2426 aaKnown RBP11.14□□□□□ -0.63
TPM3-216ENST00000473036 J3QW42 95 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 FAM20BO75063 409 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 LYNP07948 512 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 SBK2P0C263 348 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 OR2T7P0C7T2 308 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
TPM3-216ENST00000473036 DAOP14920 347 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 GCH1P30793 250 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 CX3CR1P49238 355 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 RGS6P49758 472 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 TPTEP56180 551 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 CCL8P80075 99 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 KCTD21Q4G0X4 260 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 DRAM2Q6UX65 266 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 RHOUQ7L0Q8 258 aa11.14□□□□□ -0.63
TPM3-216ENST00000473036 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms