RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 NKPD1Q17RQ9 610 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 SNAI3Q3KNW1 292 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 CDONQ4KMG0 1287 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 PGAP1Q75T13 922 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 SSX6Q7RTT6 188 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 MRPL21Q7Z2W9 205 aaKnown RBP17.1■□□□□ 0.33
SF1-213ENST00000472725 FAM220AQ7Z4H9 259 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 SYS1Q8N2H4 156 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 RFLNBQ8N5W9 214 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 PGAM5Q96HS1 289 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 DIRC2Q96SL1 478 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 REPIN1Q9BWE0 567 aaKnown RBP17.1■□□□□ 0.33
SF1-213ENST00000472725 POFUT1Q9H488 388 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 FAM206AQ9NX38 181 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 PTTG3PQ9NZH4 202 aa17.1■□□□□ 0.33
SF1-213ENST00000472725 A0A0U1RQV5 110 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 PLSCR5A0PG75 271 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 IQCF6A8MYZ5 107 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 DDOSTP39656 456 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 MRPL28Q13084 256 aaKnown RBP17.09■□□□□ 0.33
SF1-213ENST00000472725 C6orf141Q5SZD1 244 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 LAIR2Q6ISS4 152 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 PRSS57Q6UWY2 283 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 FAM57BQ71RH2 274 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 YIPF7Q8N8F6 280 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 NEU4Q8WWR8 484 aaPredicted RBP17.09■□□□□ 0.33
SF1-213ENST00000472725 CXXC4Q9H2H0 198 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 ERVK13-1Q9NX77 482 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 NKIRAS2Q9NYR9 191 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 MYEF2Q9P2K5 600 aaKnown RBP17.09■□□□□ 0.33
SF1-213ENST00000472725 NUFIP1Q9UHK0 495 aaKnown RBP17.09■□□□□ 0.33
SF1-213ENST00000472725 DIMT1Q9UNQ2 313 aaKnown RBP17.09■□□□□ 0.33
SF1-213ENST00000472725 MYRFQ9Y2G1 1151 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 R4GMQ9 66 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 LRBAP50851 2863 aa17.09■□□□□ 0.33
SF1-213ENST00000472725 SETXQ7Z333 2677 aaKnown RBP17.08■□□□□ 0.33
SF1-213ENST00000472725 LOC110117498-PIK3R3F6TDL0 507 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 PSMD9O00233 223 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 TBX1O43435 398 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 TIMM8AO60220 97 aaPredicted RBP17.08■□□□□ 0.32
SF1-213ENST00000472725 FAM20BO75063 409 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 SRSF10O75494 262 aaKnown RBP17.08■□□□□ 0.32
SF1-213ENST00000472725 ADH4P08319 380 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 SLC2A1P11166 492 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 CDKN1AP38936 164 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 MMP15P51511 669 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 ZNF92Q03936 586 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 TIGD6Q17RP2 521 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 PCGF3Q3KNV8 242 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 FAM209AQ5JX71 171 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 GLYATL3Q5SZD4 288 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 LIPNQ5VXI9 398 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 TMEM80Q96HE8 168 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 SCN3BQ9NY72 215 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 PSORS1C1Q9UIG5 152 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 ZDHHC8Q9ULC8 765 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 EXOSC1Q9Y3B2 195 aaKnown RBP17.08■□□□□ 0.32
SF1-213ENST00000472725 TACC2O95359 2948 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 NAV2Q8IVL1 2488 aa17.08■□□□□ 0.32
SF1-213ENST00000472725 C17orf100A8MU93 164 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 DENRO43583 198 aaKnown RBP17.07■□□□□ 0.32
SF1-213ENST00000472725 ADRA2AP08913 450 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 CCDC159P0C7I6 412 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 MYL12AP19105 171 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 EFNA4P52798 201 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 ATP5J2P56134 94 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 HLXQ14774 488 aaPredicted RBP17.07■□□□□ 0.32
SF1-213ENST00000472725 OR8G5Q8NG78 346 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 GGHQ92820 318 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 SGK3Q96BR1 496 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 REEP6Q96HR9 211 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 VRK1Q99986 396 aaPredicted RBP17.07■□□□□ 0.32
SF1-213ENST00000472725 ZNF649Q9BS31 505 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 ALG8Q9BVK2 526 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 TTTY10Q9BZA0 68 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 SLC22A4Q9H015 551 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 CHCHD3Q9NX63 227 aaKnown RBP17.07■□□□□ 0.32
SF1-213ENST00000472725 NOP16Q9Y3C1 178 aaKnown RBP17.07■□□□□ 0.32
SF1-213ENST00000472725 PDZD2O15018 2839 aa17.07■□□□□ 0.32
SF1-213ENST00000472725 F12P00748 615 aaPredicted RBP17.06■□□□□ 0.32
SF1-213ENST00000472725 ATP6V1B1P15313 513 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 ALDH3B1P43353 468 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 ZNF81P51508 661 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 SHEQ5VZ18 495 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 FDX2Q6P4F2 183 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 LHFPL3Q86UP9 236 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 BPIFB6Q8NFQ5 453 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 OR8B12Q8NGG6 310 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 SIGLEC11Q96RL6 698 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 PBOV1Q9GZY1 135 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 MYOZ1Q9NP98 299 aaPredicted RBP17.06■□□□□ 0.32
SF1-213ENST00000472725 BRD7Q9NPI1 651 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 FKBP14Q9NWM8 211 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 ZNF319Q9P2F9 582 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 OR52A1Q9UKL2 312 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 CAB39Q9Y376 341 aaPredicted RBP17.06■□□□□ 0.32
SF1-213ENST00000472725 TPRKBQ9Y3C4 175 aa17.06■□□□□ 0.32
SF1-213ENST00000472725 N6AMT1Q9Y5N5 214 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms