RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 IFNA14P01570 189 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 MUC1P15941 1255 aaPredicted RBP11.39□□□□□ -0.59
SMURF1-203ENST00000472627 CA6P23280 308 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 SLC9A3P48764 834 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 ST3GAL3Q11203 375 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 PIN1Q13526 163 aaPredicted RBP11.39□□□□□ -0.59
SMURF1-203ENST00000472627 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 PAPD5Q8NDF8 572 aaKnown RBP11.39□□□□□ -0.59
SMURF1-203ENST00000472627 WFDC9Q8NEX5 89 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 ZNF570Q96NI8 536 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 NKX3-1Q99801 234 aaPredicted RBP11.39□□□□□ -0.59
SMURF1-203ENST00000472627 METTL8Q9H825 291 aaKnown RBP11.39□□□□□ -0.59
SMURF1-203ENST00000472627 DNAJB11Q9UBS4 358 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 SF3B6Q9Y3B4 125 aaKnown RBP11.39□□□□□ -0.59
SMURF1-203ENST00000472627 COL7A1Q02388 2944 aa11.39□□□□□ -0.59
SMURF1-203ENST00000472627 TRAV27A0A087WT01 109 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 EFCAB9A8MZ26 197 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 SLC16A7O60669 478 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 PPP1R3DO95685 299 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 CLIC3O95833 236 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 LCATP04180 440 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 ALDOBP05062 364 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 GRPP07492 148 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 CD28P10747 220 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 CTLA4P16410 223 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 COL10A1Q03692 680 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 ARSJQ5FYB0 599 aaPredicted RBP11.38□□□□□ -0.59
SMURF1-203ENST00000472627 TEX36Q5VZQ5 186 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 DNM1P34Q6PK57 102 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 COLCA1Q6ZS62 124 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 DHDDSQ86SQ9 333 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 LRRC75AQ8NAA5 344 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 LZICQ8WZA0 190 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 SLCO4A1Q96BD0 722 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 RCC1LQ96I51 464 aaKnown RBP11.38□□□□□ -0.59
SMURF1-203ENST00000472627 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
SMURF1-203ENST00000472627 DCTN5Q9BTE1 182 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 MRPL15Q9P015 296 aaKnown RBP11.38□□□□□ -0.59
SMURF1-203ENST00000472627 RPS6KA6Q9UK32 745 aa11.38□□□□□ -0.59
SMURF1-203ENST00000472627 PRPF19Q9UMS4 504 aaKnown RBP11.38□□□□□ -0.59
SMURF1-203ENST00000472627 DNAH3Q8TD57 4116 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 GGT3PA6NGU5 568 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 F5H5K5 113 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 C3orf84H3BNL1 204 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 M0R1W7 72 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 PF4P02776 101 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 CD14P08571 375 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 ZNF26P17031 533 aaPredicted RBP11.37□□□□□ -0.59
SMURF1-203ENST00000472627 GGT2P36268 569 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 CENPAP49450 140 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 GSK3BP49841 420 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 MTPNP58546 118 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 KLRD1Q13241 179 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 MAVSQ7Z434 540 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 FUNDC1Q8IVP5 155 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 MICU2Q8IYU8 434 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 GCSAMQ8N6F7 178 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 H1FXQ92522 213 aaKnown RBP11.37□□□□□ -0.59
SMURF1-203ENST00000472627 C12orf43Q96C57 262 aaKnown RBP11.37□□□□□ -0.59
SMURF1-203ENST00000472627 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
SMURF1-203ENST00000472627 COA3Q9Y2R0 106 aaPredicted RBP11.37□□□□□ -0.59
SMURF1-203ENST00000472627 IGHV3OR15-7A0A075B7D8 119 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 A0A1W2PQ09 198 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 CD300LBA8K4G0 201 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 ANGPT2O15123 496 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
SMURF1-203ENST00000472627 PRSS12P56730 875 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 HOXA4Q00056 320 aaPredicted RBP11.36□□□□□ -0.59
SMURF1-203ENST00000472627 IKZF1Q13422 519 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 KRR1Q13601 381 aaKnown RBP11.36□□□□□ -0.59
SMURF1-203ENST00000472627 MPP2Q14168 576 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 KCNMB1Q16558 191 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 AGKQ53H12 422 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 MESTQ5EB52 335 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 EPGNQ6UW88 154 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 DLEU7Q6UYE1 221 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 CCDC80Q76M96 950 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 CROCCP2Q86T23 111 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 ADCK1Q86TW2 530 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 CCL13Q99616 98 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 PITX2Q99697 317 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 SYT4Q9H2B2 425 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 RNPEPL1Q9HAU8 725 aa11.36□□□□□ -0.59
SMURF1-203ENST00000472627 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
SMURF1-203ENST00000472627 ACSM4P0C7M7 580 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 CRABP1P29762 137 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 MSX2P35548 267 aaPredicted RBP11.35□□□□□ -0.59
SMURF1-203ENST00000472627 NAA10P41227 235 aaPredicted RBP11.35□□□□□ -0.59
SMURF1-203ENST00000472627 TPTEP56180 551 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 HIST1H3AP68431 136 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 PRB3Q04118 309 aaPredicted RBP11.35□□□□□ -0.59
SMURF1-203ENST00000472627 POU4F2Q12837 409 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 VMACQ2NL98 169 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 WDR38Q5JTN6 314 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 HIST2H3PS2Q5TEC6 136 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 GPR139Q6DWJ6 353 aa11.35□□□□□ -0.59
SMURF1-203ENST00000472627 HIST2H3AQ71DI3 136 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms