RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CCNB2O95067 398 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 PPIAL4GP0DN37 164 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 CA6P23280 308 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 PRTN3P24158 256 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 MAGEA2P43356 314 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 PITPNBP48739 271 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 MNAT1P51948 309 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 RAD23AP54725 363 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 ZNF92Q03936 586 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 BAMBIQ13145 260 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 LYPD4Q6UWN0 246 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 RASSF6Q6ZTQ3 369 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 SLC37A3Q8NCC5 494 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 OR9Q1Q8NGQ5 310 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 ZNF48Q96MX3 618 aaPredicted RBP18.83■□□□□ 0.6
C9orf3-213ENST00000471978 SLC22A4Q9H015 551 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 TBC1D23Q9NUY8 699 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 NOP16Q9Y3C1 178 aaKnown RBP18.83■□□□□ 0.6
C9orf3-213ENST00000471978 IGHV3OR16-10A0A075B7F0 116 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 FAM20BO75063 409 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 IGHV4-38-2P0DP08 117 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 PSKH1P11801 424 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 PPP1R8Q12972 351 aaKnown RBP18.82■□□□□ 0.6
C9orf3-213ENST00000471978 MPPED2Q15777 294 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 DRAM2Q6UX65 266 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 LYPD2Q6UXB3 125 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 DCDC5Q6ZRR9 648 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 DCXRQ7Z4W1 244 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 PARP8Q8N3A8 854 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 LNX2Q8N448 690 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 AQP11Q8NBQ7 271 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 C19orf18Q8NEA5 215 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 OR2AE1Q8NHA4 323 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 DACT3Q96B18 629 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-213ENST00000471978 COPS4Q9BT78 406 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 ADAT1Q9BUB4 502 aaKnown RBP18.82■□□□□ 0.6
C9orf3-213ENST00000471978 TSSK6Q9BXA6 273 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 CLN8Q9UBY8 286 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 COMMD3-BMI1R4GMX3 469 aa18.82■□□□□ 0.6
C9orf3-213ENST00000471978 PKD1L1Q8TDX9 2849 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 KIR2DS1A0A191URI9 304 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 GGT3PA6NGU5 568 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 SPARCP09486 303 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 HKR1P10072 659 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 ANOS1P23352 680 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 FMO3P31513 532 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 OTX1P32242 354 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-213ENST00000471978 GLYATL3Q5SZD4 288 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 SGMS2Q8NHU3 365 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 UPRTQ96BW1 309 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 C1orf147Q96MC9 270 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-213ENST00000471978 ZMAT3Q9HA38 289 aaKnown RBP18.81■□□□□ 0.6
C9orf3-213ENST00000471978 FN3KRPQ9HA64 309 aa18.81■□□□□ 0.6
C9orf3-213ENST00000471978 TCRBV5S2A0A599 114 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 C5orf63A6NC05 138 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 B2RBV5 119 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 GMDSO60547 372 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 GYPBP06028 91 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 ENTPD1P49961 510 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 PRKXP51817 358 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 FOXL1Q12952 345 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 CRMP1Q14194 572 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 TAF13Q15543 124 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 ZNF511Q8NB15 262 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 OR4Q3Q8NH05 313 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 SLAMF6Q96DU3 332 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 NUDT16L1Q9BRJ7 211 aaKnown RBP18.8■□□□□ 0.6
C9orf3-213ENST00000471978 MAGIXQ9H6Y5 334 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 CENPMQ9NSP4 180 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 RNF7Q9UBF6 113 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 BAIAP2Q9UQB8 552 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 N6AMT1Q9Y5N5 214 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 U3KQV3 271 aa18.8■□□□□ 0.6
C9orf3-213ENST00000471978 ZNF593O00488 134 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-213ENST00000471978 PHYHO14832 338 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 SOX14O95416 240 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 EGR1P18146 543 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 MTNR1AP48039 350 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 HOXA4Q00056 320 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-213ENST00000471978 PCK2Q16822 640 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 MICAQ29983 383 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 WDR25Q64LD2 544 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-213ENST00000471978 ZNF841Q6ZN19 808 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 C9orf139Q6ZV77 190 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 DHFR2Q86XF0 187 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 FITM2Q8N6M3 262 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 OR2T33Q8NG76 320 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 KCNJ15Q99712 375 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 NMNAT2Q9BZQ4 307 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 REEP1Q9H902 201 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 ARMC1Q9NVT9 282 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 VNN3Q9NY84 501 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 MRPL15Q9P015 296 aaKnown RBP18.79■□□□□ 0.6
C9orf3-213ENST00000471978 SAMHD1Q9Y3Z3 626 aaKnown RBP18.79■□□□□ 0.6
C9orf3-213ENST00000471978 PCDHGB1Q9Y5G3 927 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 SOX21Q9Y651 276 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-213ENST00000471978 MGAM2Q2M2H8 2515 aa18.79■□□□□ 0.6
C9orf3-213ENST00000471978 TRAV40A0A0B4J280 105 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 SPRY1O43609 319 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-213ENST00000471978 PLATP00750 562 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms