RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 EVX1P49640 407 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 TGFBR3Q03167 851 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 HGFACQ04756 655 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 RIN1Q13671 783 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ZNF79Q15937 498 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ST3GAL2Q16842 350 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 UBE2NLQ5JXB2 153 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 GLT8D1Q68CQ7 371 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 RTL6Q6ICC9 239 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 XKRXQ6PP77 449 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 FAM131AQ6UXB0 335 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 SEM1Q6ZVN7 128 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 PGAP1Q75T13 922 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 CD163Q86VB7 1156 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 CNEP1R1Q8N9A8 125 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 CPEB3Q8NE35 698 aaKnown RBP8.18□□□□□ -1.1
VPS52-216ENST00000471309 DNAAF1Q8NEP3 725 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 C1orf162Q8NEQ5 155 aaPredicted RBP8.18□□□□□ -1.1
VPS52-216ENST00000471309 OR5D14Q8NGL3 314 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 OR14K1Q8NGZ2 314 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ZNF671Q8TAW3 534 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ZCCHC14Q8WYQ9 949 aaKnown RBP8.18□□□□□ -1.1
VPS52-216ENST00000471309 BCL2L2Q92843 193 aaPredicted RBP8.18□□□□□ -1.1
VPS52-216ENST00000471309 FGGYQ96C11 551 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 C10orf35Q96D05 121 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ADAT3Q96EY9 351 aaPredicted RBP8.18□□□□□ -1.1
VPS52-216ENST00000471309 LYZL4Q96KX0 146 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 SOSTQ9BQB4 213 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 SRRQ9GZT4 340 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 RGCCQ9H4X1 137 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 RNF121Q9H920 327 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 LIN7BQ9HAP6 207 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 PLEKHA1Q9HB21 404 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 NOX3Q9HBY0 568 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 PLSCR4Q9NRQ2 329 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 CYSLTR2Q9NS75 346 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 STEAP1Q9UHE8 339 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 V9GYS6 101 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 BAHCC1Q9P281 2608 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 DNAJC13O75165 2243 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 ISPDA4D126 451 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 C5orf63A6NC05 138 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 SLC17A2O00624 439 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 XRCC2O43543 280 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 SULT1B1O43704 296 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 MTRF1O75570 445 aaKnown RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 PAHP00439 452 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 CGAP01215 116 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 ERCC1P07992 297 aaPredicted RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 TMIGD3P0DMS9 266 aaPredicted RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 RAB3AP20336 220 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 IGHV1-2P23083 117 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 BDKRB2P30411 391 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 THBS4P35443 961 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 TIMP3P35625 211 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 GNALP38405 381 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 PER3P56645 1201 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 FOXF2Q12947 444 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 GSG1Q2KHT4 349 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 GFOD2Q3B7J2 385 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 SNAI3Q3KNW1 292 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 TBRG1Q3YBR2 411 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 HIKESHIQ53FT3 197 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 FAM166AQ6J272 317 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 VWA1Q6PCB0 445 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 BAIAP2L2Q6UXY1 529 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 COLCA1Q6ZS62 124 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 NAA40Q86UY6 237 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 LYPD6Q86Y78 171 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 CCDC36Q8IYA8 594 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 GABRG1Q8N1C3 465 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 CISD2Q8N5K1 135 aaKnown RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 GDPD1Q8N9F7 314 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 OR1M1Q8NGA1 313 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 OR51A2Q8NGJ7 313 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 OR6M1Q8NGM8 313 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 OR5H6Q8NGV6 325 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 FAM71F1Q96KD3 344 aaPredicted RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 SDHCQ99643 169 aaPredicted RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 C1QTNF5Q9BXJ0 243 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 TP63Q9H3D4 680 aaPredicted RBP8.17□□□□□ -1.1
VPS52-216ENST00000471309 PPP1R3EQ9H7J1 279 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 TMEM138Q9NPI0 162 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 B3GNT2Q9NY97 397 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 APC2O95996 2303 aa8.17□□□□□ -1.1
VPS52-216ENST00000471309 LOC100509620A0A075B734 347 aa8.16□□□□□ -1.1
VPS52-216ENST00000471309 A0A0B4J203 849 aa8.16□□□□□ -1.1
VPS52-216ENST00000471309 TMEM8BA6NDV4 472 aa8.16□□□□□ -1.1
VPS52-216ENST00000471309 PRRG2O14669 202 aa8.16□□□□□ -1.1
VPS52-216ENST00000471309 TOXO94900 526 aa8.16□□□□□ -1.1
VPS52-216ENST00000471309 LCATP04180 440 aa8.16□□□□□ -1.1
VPS52-216ENST00000471309 CD79AP11912 226 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms