RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 VAMP5O95183 116 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 SNAPINO95295 136 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 CD160O95971 181 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ORM1P02763 201 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ATP6V1B2P21281 511 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ME2P23368 584 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 CCNE1P24864 410 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 COILP38432 576 aaPredicted RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 MAGEA12P43365 314 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 CRISP1P54107 249 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ERVS71-1P61550 626 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 TLE4Q04727 773 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 STX4Q12846 297 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 NDUFA9Q16795 377 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 DGUOKQ16854 277 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 TRMT5Q32P41 509 aaKnown RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 BSXQ3C1V8 233 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 CCDC153Q494R4 210 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 OR8G2PQ6IF36 304 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 APOBEC3HQ6NTF7 200 aaKnown RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ATRAIDQ6UW56 229 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 DRAM2Q6UX65 266 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ZNF836Q6ZNA1 936 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 MBOAT1Q6ZNC8 495 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 LINC00336Q6ZUF6 198 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ACOT7LQ6ZUV0 252 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 SLC51BQ86UW2 128 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 MTURNQ8N3F0 131 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 RIBC1Q8N443 379 aaPredicted RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ATP6V0D2Q8N8Y2 350 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 CCDC54Q8NEL0 328 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 OR4F17Q8NGA8 305 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 OR51A7Q8NH64 312 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 OR5K2Q8NHB8 316 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 DYNC2LI1Q8TCX1 351 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 APH1BQ8WW43 257 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 MRPS31Q92665 395 aaKnown RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 PTH2Q96A98 100 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 DGCR14Q96DF8 476 aaKnown RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 MBOAT7Q96N66 472 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 OR4F4Q96R69 305 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 TBX15Q96SF7 602 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 RNF2Q99496 336 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 KLHDC3Q9BQ90 382 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 TMEM121Q9BTD3 319 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ULBP1Q9BZM6 244 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 NAA50Q9GZZ1 169 aaKnown RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 METTL9Q9H1A3 318 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 BEX1Q9HBH7 125 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 RETNQ9HD89 108 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 FGF20Q9NP95 211 aaPredicted RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ASCL3Q9NQ33 180 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 C12orf4Q9NQ89 552 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 DIABLOQ9NR28 239 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 CLN6Q9NWW5 311 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 HRASLS2Q9NWW9 162 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 OPN4Q9UHM6 478 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 LSM7Q9UK45 103 aaKnown RBP3.13□□□□□ -1.91
COL11A1-208ENST00000470170 GUCA1BQ9UMX6 200 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 TFR2Q9UP52 801 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ERVW-1Q9UQF0 538 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 ARL2BPQ9Y2Y0 163 aa3.13□□□□□ -1.91
COL11A1-208ENST00000470170 IGLV3-16A0A075B6K0 115 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 A0A1B0GVI7 797 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TCRBV9S1A1TA0A576 114 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TSPAN11A1L157 253 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TRDCB7Z8K6 153 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 M0QZ92 97 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 CDC7O00311 574 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 PPP1R2P9O14990 202 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 SSNA1O43805 119 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 CXCL13O43927 109 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 HPGDSO60760 199 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 ALOX12BO75342 701 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 OR7A10O76100 309 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 C1orf105O95561 183 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 OXSR1O95747 527 aaPredicted RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 HLA-AP01891 365 aaKnown RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 HBE1P02100 147 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 HOXB7P09629 217 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 HIST1H1CP16403 213 aaKnown RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 CD36P16671 472 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 S100A1P23297 94 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 IL12AP29459 219 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TGFBR2P37173 567 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 LEPP41159 167 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 OMPP47874 163 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 PPOXP50336 477 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 IDH3GP51553 393 aaPredicted RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 MAD2L1BPQ15013 274 aaPredicted RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 RAB35Q15286 201 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TAL2Q16559 108 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TRIM16LQ309B1 348 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 ZCWPW2Q504Y3 356 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TIMM23BQ5SRD1 257 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 DCST2Q5T1A1 773 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 FAM45BPQ6NSW5 357 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 DNM1P34Q6PK57 102 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 IL34Q6ZMJ4 242 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms