RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OR5AS1Q8N127 324 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 CHST4Q8NCG5 386 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 FBXW5Q969U6 566 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 WDR77Q9BQA1 342 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-209ENST00000470026 MESP1Q9BRJ9 268 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 EMC6Q9BV81 110 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 A0A0A6YYD4 124 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 GP1BAP07359 652 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 GNB3P16520 340 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 ATF4P18848 351 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 CNR1P21554 472 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 DLSTP36957 453 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 VAX1Q5SQQ9 334 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 ANGPTL5Q86XS5 388 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 SLC25A45Q8N413 288 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 NOXO1Q8NFA2 376 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF75AQ96N20 296 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 SELENOIQ9C0D9 397 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 GAREM1Q9H706 876 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 IFT46Q9NQC8 304 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF878C9JN71 531 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 F8VVB4 439 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 F8VWA3 439 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 LIPCP11150 499 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF93P35789 620 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 TAS2R31P59538 309 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 PPIAP62937 165 aaKnown RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 MYBPHQ13203 477 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 INPP5JQ15735 1006 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 PAN3Q58A45 887 aaKnown RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 FAM74A1Q5RGS3 127 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 AWAT2Q6E213 333 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 PNRC2Q9NPJ4 139 aaKnown RBP12.1□□□□□ -0.47
BRCA1-209ENST00000470026 C12orf4Q9NQ89 552 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
BRCA1-209ENST00000470026 UNC13CQ8NB66 2214 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 TOX3O15405 576 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-209ENST00000470026 CRHP06850 196 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF17P17021 662 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 AVPR2P30518 371 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 STARP49675 285 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 PRKXP51817 358 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 SNTB1Q13884 538 aaKnown RBP12.09□□□□□ -0.47
BRCA1-209ENST00000470026 HIST3H3Q16695 136 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-209ENST00000470026 FAM122CQ6P4D5 195 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 RNF144BQ7Z419 303 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 OR51E1Q8TCB6 317 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 NUDT22Q9BRQ3 303 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
BRCA1-209ENST00000470026 MPTX1A8MV57 137 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 H3BML4 177 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 TOR1AO14656 332 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 ONECUT2O95948 504 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 IGHG1P01857 330 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 EMP2P54851 167 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 EIF3IQ13347 325 aaKnown RBP12.08□□□□□ -0.47
BRCA1-209ENST00000470026 ACTBL2Q562R1 376 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 ATRAIDQ6UW56 229 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 PGAP1Q75T13 922 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 NAA40Q86UY6 237 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 TMEM17Q86X19 198 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 UEVLDQ8IX04 471 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 ARRDC1Q8N5I2 433 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 SLC38A9Q8NBW4 561 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 TMEM185AQ8NFB2 350 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 THAP6Q8TBB0 222 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 ELP5Q8TE02 316 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 PMEPA1Q969W9 287 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 ZC3H10Q96K80 434 aaKnown RBP12.08□□□□□ -0.47
BRCA1-209ENST00000470026 NICN1Q9BSH3 213 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 NMES1Q9C002 83 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 GPR132Q9UNW8 380 aa12.08□□□□□ -0.47
BRCA1-209ENST00000470026 A0A0B4J2A0 478 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 TRBV11-1A0A0K0K1C0 115 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-209ENST00000470026 FGF16O43320 207 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 HEXBP07686 556 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 HIST1H1DP16402 221 aaKnown RBP12.08□□□□□ -0.48
BRCA1-209ENST00000470026 CX3CR1P49238 355 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF41P51814 821 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-209ENST00000470026 PNLIPRP3Q17RR3 467 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 LRRC37A5PQ49AS3 106 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms