RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ALX3O95076 343 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 DBHP09172 617 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 OCM2P0CE71 109 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 NR4A1P22736 598 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 CFL1P23528 166 aaKnown RBP11.06□□□□□ -0.64
TRAF4-208ENST00000469529 IL32P24001 234 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 APEX1P27695 318 aaKnown RBP11.06□□□□□ -0.64
TRAF4-208ENST00000469529 APLNRP35414 380 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■□□□ 13.5
TRAF4-208ENST00000469529 MRPL49Q13405 166 aaKnown RBP11.06□□□□□ -0.64
TRAF4-208ENST00000469529 C4orf17Q53FE4 359 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 C22orf42Q6IC83 251 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 CLEC18BQ6UXF7 455 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 DOK3Q7L591 496 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 NAA40Q86UY6 237 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 CROCCP3Q8IVE0 287 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 RDH10Q8IZV5 341 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 CLEC18CQ8NCF0 446 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 SLC7A6Q92536 515 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 APOBEC3DQ96AK3 386 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-208ENST00000469529 DCSTAMPQ9H295 470 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 EXOSC4Q9NPD3 245 aaKnown RBP11.06□□□□□ -0.64
TRAF4-208ENST00000469529 ZNF275Q9NSD4 429 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-208ENST00000469529 SNTG1Q9NSN8 517 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 FOXJ3Q9UPW0 622 aa11.06□□□□□ -0.64
TRAF4-208ENST00000469529 A0A1W2PPW3 197 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 XRCC2O43543 280 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 MTRF1O75570 445 aaKnown RBP11.05□□□□□ -0.64
TRAF4-208ENST00000469529 CD2P06729 351 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 ANXA2P07355 339 aaKnown RBP11.05□□□□□ -0.64
TRAF4-208ENST00000469529 ZNF35P13682 527 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 SRMP19623 302 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 RPS19P39019 145 aaKnown RBP11.05□□□□□ -0.64
TRAF4-208ENST00000469529 ASCL1P50553 236 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 PSMD7P51665 324 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 ADORA2A-AS1P86434 159 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 HGFACQ04756 655 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 FAM27E3Q08E93 113 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 ZBTB37Q5TC79 503 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 FAM57BQ71RH2 274 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 LUZP2Q86TE4 346 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 RP1L1Q8IWN7 2480 aaPredicted RBP11.05□□□□□ -0.64
TRAF4-208ENST00000469529 SLC30A7Q8NEW0 376 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 MUCL1Q96DR8 90 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 PGAM5Q96HS1 289 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 NXF2Q9GZY0 626 aaKnown RBP11.05□□□□□ -0.64
TRAF4-208ENST00000469529 PPIL3Q9H2H8 161 aaKnown RBP11.05□□□□□ -0.64
TRAF4-208ENST00000469529 OPA3Q9H6K4 179 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 SH3BGRL2Q9UJC5 107 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 V9GYS6 101 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 DOPEY2Q9Y3R5 2298 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 ZGRF1Q86YA3 2104 aa11.05□□□□□ -0.64
TRAF4-208ENST00000469529 CACNA1CQ13936 2221 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 A0A1B0GVI7 797 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 LOC107986453A0A1B0GWG9 222 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 SYT7O43581 403 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 LCATP04180 440 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 FSTP19883 344 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 CFPP27918 469 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 LSM3P62310 102 aaKnown RBP11.04□□□□□ -0.64
TRAF4-208ENST00000469529 DYNC1I2Q13409 638 aaKnown RBP11.04□□□□□ -0.64
TRAF4-208ENST00000469529 ESPL1Q14674 2120 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 DGUOKQ16854 277 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 TBC1D28Q2M2D7 210 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 HSD17B12Q53GQ0 312 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 ZNF529Q6P280 563 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 UNQ6126/PRO20091Q6UXV3 157 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 CDH26Q8IXH8 852 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 OR5L1Q8NGL2 311 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 OR14K1Q8NGZ2 314 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 OR10AC1Q8NH08 325 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 NDNFQ8TB73 568 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 OR51E1Q8TCB6 317 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 AKAP1Q92667 903 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRAF4-208ENST00000469529 TMEM106AQ96A25 262 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 SLC25A46Q96AG3 418 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 S100PBPQ96BU1 408 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 OR14A2Q96R54 314 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 KCNS3Q9BQ31 491 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
TRAF4-208ENST00000469529 ACTR6Q9GZN1 396 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 RNF167Q9H6Y7 350 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 GPR84Q9NQS5 396 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 CCDC59Q9P031 241 aaKnown RBP11.04□□□□□ -0.64
TRAF4-208ENST00000469529 DHDHQ9UQ10 334 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 ARHGAP21Q5T5U3 1957 aa11.04□□□□□ -0.64
TRAF4-208ENST00000469529 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
TRAF4-208ENST00000469529 A0A075B6Q4 140 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 EEF1E1-BLOC1S5C9J1V9 151 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 P2RY10O00398 339 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 EEF1E1O43324 174 aaKnown RBP11.03□□□□□ -0.64
TRAF4-208ENST00000469529 DHRS3O75911 302 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 SLC2A1P11166 492 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 EPXP11678 715 aa11.03□□□□□ -0.64
TRAF4-208ENST00000469529 ZNF182P17025 639 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms