RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 OTULINQ96BN8 352 aa14.39□□□□□ -0.11
SSBP1-207ENST00000468267 REPIN1Q9BWE0 567 aaKnown RBP14.39□□□□□ -0.11
SSBP1-207ENST00000468267 MARCH7Q9H992 704 aa14.39□□□□□ -0.11
SSBP1-207ENST00000468267 NTN4Q9HB63 628 aa14.39□□□□□ -0.11
SSBP1-207ENST00000468267 PCDHB10Q9UN67 800 aa14.39□□□□□ -0.11
SSBP1-207ENST00000468267 A0A0G2JMP0 313 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 A0A0X1KG70 313 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 C5orf63A6NC05 138 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 CD300LBA8K4G0 201 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 ZNF878C9JN71 531 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 J3QLI3 93 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 AVPP01185 164 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 HLA-DPB1P04440 258 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 MDH2P40926 338 aaKnown RBP14.38□□□□□ -0.11
SSBP1-207ENST00000468267 EIF2B1Q14232 305 aaKnown RBP14.38□□□□□ -0.11
SSBP1-207ENST00000468267 C1orf229Q6ZS94 237 aaPredicted RBP14.38□□□□□ -0.11
SSBP1-207ENST00000468267 DPY19L4Q7Z388 723 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 ERI1Q8IV48 349 aaKnown RBP14.38□□□□□ -0.11
SSBP1-207ENST00000468267 RFLNBQ8N5W9 214 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 OR4M2Q8NGB6 313 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 OR2AE1Q8NHA4 323 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 ZNF420Q8TAQ5 688 aaPredicted RBP14.38□□□□□ -0.11
SSBP1-207ENST00000468267 NRBF2Q96F24 287 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 INTS14Q96SY0 518 aa14.38□□□□□ -0.11
SSBP1-207ENST00000468267 PATZ1Q9HBE1 687 aaKnown RBP14.38□□□□□ -0.11
SSBP1-207ENST00000468267 PRR23D1E9PI22 279 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 GATA3P23771 443 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 ZFP36P26651 326 aaKnown RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 GATA4P43694 442 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 SLC15A1P46059 708 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 RASSF2P50749 326 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 GRB2P62993 217 aaKnown RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 LCN2P80188 198 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 ZNF181Q2M3W8 571 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 KRTAP24-1Q3LI83 254 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 GLYATL3Q5SZD4 288 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 DCAF12L2Q5VW00 463 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 PLBD1Q6P4A8 553 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 SHQ1Q6PI26 577 aaKnown RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 SPATC1Q76KD6 591 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 SHFQ7M4L6 423 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 MOGAT3Q86VF5 341 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 TIGD4Q8IY51 512 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 TEX29Q8N6K0 151 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 CELF2-AS1Q8N7Q2 184 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 OR6N2Q8NGY6 317 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 UTP4Q969X6 686 aaKnown RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 ABHD6Q9BV23 337 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 TMPRSS13Q9BYE2 586 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 SLC22A4Q9H015 551 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 OR51V1Q9H2C8 321 aa14.37□□□□□ -0.11
SSBP1-207ENST00000468267 METTL17Q9H7H0 456 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-207ENST00000468267 PPIAL4EA0A075B759 164 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 PPIAL4CA0A0B4J2A2 164 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 IGHV3-64DA0A0J9YX35 117 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 LRRC30A6NM36 301 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 F5H0A9 414 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-207ENST00000468267 PPIAL4DF5H284 164 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 FOXH1O75593 365 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 TIPRLO75663 272 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 ATP5HO75947 161 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 CYB5R3P00387 301 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-207ENST00000468267 PPIAL4FP0DN26 164 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 SLC2A1P11166 492 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 CA6P23280 308 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 PMELP40967 661 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 CD200P41217 278 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 MAB21L1Q13394 359 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 LIPNQ5VXI9 398 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 RHOUQ7L0Q8 258 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 CPOQ8IVL8 374 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 MUC20Q8N307 709 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-207ENST00000468267 RNF133Q8WVZ7 376 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 DNAJC9Q8WXX5 260 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 ERGIC1Q969X5 290 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 ZMYND19Q96E35 227 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-207ENST00000468267 TOR3AQ9H497 397 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 OPA3Q9H6K4 179 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 TMEM165Q9HC07 324 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 SLC25A19Q9HC21 320 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 POLR3KQ9Y2Y1 108 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-207ENST00000468267 NOP16Q9Y3C1 178 aaKnown RBP14.36□□□□□ -0.11
SSBP1-207ENST00000468267 N6AMT1Q9Y5N5 214 aa14.36□□□□□ -0.11
SSBP1-207ENST00000468267 LOC105371242A0A075B767 164 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 GGT3PA6NGU5 568 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 PRODHO43272 600 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 XRCC2O43543 280 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 TCF21O43680 179 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 GMDSO60547 372 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 FSTL3O95633 263 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 CX3CR1P49238 355 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 SCGB2A2Q13296 93 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 OR8G1Q15617 311 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 TMEM236Q5W0B7 351 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 FAHD1Q6P587 224 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 Q8TCH9 128 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 SPSB4Q96A44 273 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 AMELYQ99218 206 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms