RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 SLC9A2Q9UBY0 812 aa4.95□□□□□ -1.62
LRCH3-212ENST00000466845 SS18L2Q9UHA2 77 aa4.95□□□□□ -1.62
LRCH3-212ENST00000466845 RSL24D1Q9UHA3 163 aaKnown RBP4.95□□□□□ -1.62
LRCH3-212ENST00000466845 CD84Q9UIB8 345 aa4.95□□□□□ -1.62
LRCH3-212ENST00000466845 C14orf166Q9Y224 244 aaKnown RBP4.95□□□□□ -1.62
LRCH3-212ENST00000466845 SLC17A4Q9Y2C5 497 aa4.95□□□□□ -1.62
LRCH3-212ENST00000466845 PEX16Q9Y5Y5 336 aa4.95□□□□□ -1.62
LRCH3-212ENST00000466845 COL4A1P02462 1669 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TRBV9A0A0B4J1U6 114 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 LRRC30A6NM36 301 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 I3L4J1 428 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 DNASE2O00115 360 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 MRASO14807 208 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TNFRSF13BO14836 293 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 RGS14O43566 566 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TPST1O60507 370 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TNFSF15O95150 251 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 SLC25A27O95847 323 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 BMP15O95972 392 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 IFNA17P01571 189 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 SERPINA7P05543 415 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 NHLRC4P0CG21 123 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 DUX4L4P0CJ87 422 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 UGT2B7P16662 529 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 IMPDH1P20839 514 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ADORA2AP29274 412 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ADORA2BP29275 332 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 MPGP29372 298 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 PRDX3P30048 256 aaKnown RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 HSD17B3P37058 310 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 HTR5AP47898 357 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 BTN3A2P78410 334 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 EMX1Q04741 257 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ELAVL2Q12926 359 aaKnown RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ECH1Q13011 328 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TWIST1Q15672 202 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ARHGAP11BQ3KRB8 267 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ACTL10Q5JWF8 245 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 FAM71E1Q6IPT2 247 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 IRF2BP2Q7Z5L9 587 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 HAPLN4Q86UW8 402 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 SLC30A8Q8IWU4 369 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 OR6K2Q8NGY2 324 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 C16orf52Q8NHV5 167 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 SYNPRQ8TBG9 265 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 DCAKDQ8WVC6 231 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 HPSE2Q8WWQ2 592 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 SNAPC3Q92966 411 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 SMIM19Q96E16 107 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 CENPNQ96H22 339 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ITCHQ96J02 903 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 RITA1Q96K30 269 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 CAPNS2Q96L46 248 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 KCTD7Q96MP8 289 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 COL21A1Q96P44 957 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TBX5Q99593 518 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 VN1R3Q9BXE9 311 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 DCSTAMPQ9H295 470 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 FAM96AQ9H5X1 160 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 DCAF13Q9NV06 445 aaKnown RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 DUS2Q9NX74 493 aaKnown RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 ZNF107Q9UII5 783 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-212ENST00000466845 STUB1Q9UNE7 303 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 PSG8Q9UQ74 426 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 FAM96BQ9Y3D0 163 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 CEPT1Q9Y6K0 416 aa4.94□□□□□ -1.62
LRCH3-212ENST00000466845 MYH11P35749 1972 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 ISPDA4D126 451 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 K7ERU9 68 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 AP4M1O00189 453 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 CLIC1O00299 241 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 TMPRSS11DO60235 418 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 SPAG7O75391 227 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 MT-CO3P00414 261 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 IFNA1P01562 189 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 P04436 131 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 CTSLP07711 333 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 OR56A5P0C7T3 313 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 SP9P0CG40 484 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 UNGP13051 313 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-212ENST00000466845 GP9P14770 177 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 HIST1H1BP16401 226 aaKnown RBP4.93□□□□□ -1.62
LRCH3-212ENST00000466845 ALOX5APP20292 161 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 AK4P27144 223 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-212ENST00000466845 DUSP1P28562 367 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 FGF9P31371 208 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-212ENST00000466845 BDKRB1P46663 353 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 EFNB2P52799 333 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 OR10A3P58181 314 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 TAS2R38P59533 333 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 TBPL1P62380 186 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 CDK3Q00526 305 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 TIAL1Q01085 375 aaKnown RBP eCLIP4.93□□□□□ -1.62
LRCH3-212ENST00000466845 CRYZQ08257 329 aaKnown RBP4.93□□□□□ -1.62
LRCH3-212ENST00000466845 TCP10Q12799 353 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 NME3Q13232 169 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 SOHLH1Q5JUK2 328 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 FNBP1LQ5T0N5 605 aa4.93□□□□□ -1.62
LRCH3-212ENST00000466845 HENMT1Q5T8I9 393 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms