RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SERPINB8P50452 374 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 EIF4EBP1Q13541 118 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 EIF4EBP2Q13542 120 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 C5orf64Q2M2E5 130 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SMUG1Q53HV7 270 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 TPRG1LQ5T0D9 272 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 C16orf87Q6PH81 154 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF547Q8IVP9 402 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 UBAC2Q8NBM4 344 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 PROKR2Q8NFJ6 384 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 FRZBQ92765 325 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 APH1AQ96BI3 265 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 CERS2Q96G23 380 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 RNF157Q96PX1 679 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SPIN2AQ99865 258 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SPIN2BQ9BPZ2 258 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 AGMATQ9BSE5 352 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLIRPQ9GZT3 109 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 TOLLIPQ9H0E2 274 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 DYRK4Q9NR20 520 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 NECAP2Q9NVZ3 263 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 PRO0461Q9UI25 63 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 RFNGQ9Y644 331 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 IGHV1-69DA0A0B4J2H0 117 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 IGKV1-8A0A0C4DH67 115 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC22A20A6NK97 555 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 TNFRSF11BO00300 401 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 NVLO15381 856 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 RBFOX2O43251 390 aaKnown RBP eCLIP2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF207O43670 478 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 RAD1O60671 282 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 TDP2O95551 362 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 OXTP01178 125 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 RHOXF2BP0C7M4 288 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 PCK1P35558 622 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 GFERP55789 205 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 MPV17L2Q567V2 206 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF684Q5T5D7 378 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC16A13Q7RTY0 426 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 VTCN1Q7Z7D3 282 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 NKAIN4Q8IVV8 208 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR4K5Q8NGD3 323 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR10W1Q8NGF6 305 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR5T3Q8NGG3 340 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 SGTBQ96EQ0 304 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR52D1Q9H346 318 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 CHTOPQ9Y3Y2 248 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 PCDH11XQ9BZA7 1347 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLIT3O75094 1523 aa2.63□□□□□ -1.99
CDC42BPA-211ENST00000466538 ERICH4A6NGS2 130 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF701M0R085 212 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 GABRPO00591 440 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 SIVA1O15304 175 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 SCELO95171 688 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 SNAI1O95863 264 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 PRB2P02812 416 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR8U9P0C7N5 309 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 C1GALT1C1LP0DN25 315 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 MUC1P15941 1255 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 BMI1P35226 326 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 TALDO1P37837 337 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 MYCNOSP40205 109 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 OPRK1P41145 380 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 PPICP45877 212 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR1G1P47890 313 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 CXCL12P48061 93 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 RAB7AP51149 207 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 CLDN6P56747 220 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR2B8PP59922 312 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 RPL23P62829 140 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 CRADDP78560 199 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF829Q3KNS6 432 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 NKAIN1Q4KMZ8 207 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 AP1ARQ63HQ0 302 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 ULK3Q6PHR2 472 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 LINC00523Q86TU6 105 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF695Q8IW36 515 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 WDFY1Q8IWB7 410 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 KIF2BQ8N4N8 673 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 CSGALNACT2Q8N6G5 542 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR5AR1Q8NGP9 310 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR6N1Q8NGY5 312 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 LILRB4Q8NHJ6 448 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 SYNPRQ8TBG9 265 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 PIH1D2Q8WWB5 315 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 ISOC2Q96AB3 205 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 TEAD3Q99594 435 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 BCL7BQ9BQE9 202 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 RSG1Q9BU20 258 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 SAMD10Q9BYL1 202 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 CHMP4BQ9H444 224 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 EXOSC4Q9NPD3 245 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZDHHC4Q9NPG8 344 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 PRSS16Q9NQE7 514 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 RRAGDQ9NQL2 400 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 TREX1Q9NSU2 369 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 TSSC4Q9Y5U2 329 aaPredicted RBP2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 COMMD3-BMI1R4GMX3 469 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 MROH5Q6ZUA9 1318 aa2.62□□□□□ -1.99
CDC42BPA-211ENST00000466538 PIK3R4Q99570 1358 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms