RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 WDR25Q64LD2 544 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-206ENST00000466532 RPL13AP3Q6NVV1 102 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 FITM2Q8N6M3 262 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 CYB561A3Q8NBI2 242 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 PROKR2Q8NFJ6 384 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 OR10S1Q8NGN2 331 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 NOP16Q9Y3C1 178 aaKnown RBP15.97■□□□□ 0.15
COL9A3-206ENST00000466532 CDH10Q9Y6N8 788 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 MGAM2Q2M2H8 2515 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 MDFIC2A0A1B0GVS7 189 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 TVP23AA6NH52 213 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 CD300LBA8K4G0 201 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 HOXA4Q00056 320 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-206ENST00000466532 ZNF92Q03936 586 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 SNAI3Q3KNW1 292 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 PRR31Q5SQ13 230 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 ZNF841Q6ZN19 808 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 OR9Q2Q8NGE9 314 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 OR2AE1Q8NHA4 323 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 ADAT1Q9BUB4 502 aaKnown RBP15.96■□□□□ 0.15
COL9A3-206ENST00000466532 SLC22A4Q9H015 551 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 MMADHCQ9H3L0 296 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-206ENST00000466532 UNKLQ9H9P5 680 aaKnown RBP15.96■□□□□ 0.15
COL9A3-206ENST00000466532 FN3KRPQ9HA64 309 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 RNF7Q9UBF6 113 aa15.96■□□□□ 0.15
COL9A3-206ENST00000466532 GGT3PA6NGU5 568 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 BHLHE40O14503 412 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 PSMB10P40306 273 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 FGF12P61328 243 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 IL13RA1P78552 427 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 LYPD4Q6UWN0 246 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 BRD3OSQ6XYD6 125 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 CPLX4Q7Z7G2 160 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 BOLLQ8N9W6 283 aaKnown RBP15.95■□□□□ 0.14
COL9A3-206ENST00000466532 OR51L1Q8NGJ5 315 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 OR2T4Q8NH00 348 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 ZNRF4Q8WWF5 429 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 TAF15Q92804 592 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL9A3-206ENST00000466532 TECTBQ96PL2 329 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 DDOQ99489 341 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 LYVE1Q9Y5Y7 322 aa15.95■□□□□ 0.14
COL9A3-206ENST00000466532 C22orf46C9J442 243 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 ENSAO43768 121 aaKnown RBP15.94■□□□□ 0.14
COL9A3-206ENST00000466532 GMDSO60547 372 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 KRT36O76013 467 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 ANOS1P23352 680 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 OTX1P32242 354 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-206ENST00000466532 NPY4RP50391 375 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 KCNJ8Q15842 424 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 GLYATL3Q5SZD4 288 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 SFRP4Q6FHJ7 346 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-206ENST00000466532 DRAM2Q6UX65 266 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 DCXRQ7Z4W1 244 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 OR9Q1Q8NGQ5 310 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 ZDHHC16Q969W1 377 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 BTBD10Q9BSF8 475 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 COPS4Q9BT78 406 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF696Q9H7X3 374 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 ARL8BQ9NVJ2 186 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 TAGLN3Q9UI15 199 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 COMMD3-BMI1R4GMX3 469 aa15.94■□□□□ 0.14
COL9A3-206ENST00000466532 TNFRSF11BO00300 401 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 HOXA3O43365 443 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-206ENST00000466532 SPARCP09486 303 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 PSKH1P11801 424 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 HMGA2P52926 109 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 MXRA7P84157 204 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 OR8B8Q15620 311 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 DEFB112Q30KQ8 113 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 GPR157Q5UAW9 335 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 C16orf89Q6UX73 402 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 DEFB107AQ8IZN7 70 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 LINC00471Q8N535 108 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 SLC37A3Q8NCC5 494 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 OR4C15Q8NGM1 316 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 OR8D4Q8NGM9 314 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 PCGF1Q9BSM1 259 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 TBC1D23Q9NUY8 699 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 IL20Q9NYY1 176 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 MRPL15Q9P015 296 aaKnown RBP15.93■□□□□ 0.14
COL9A3-206ENST00000466532 ERVK-18Q9QC07 812 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 CTSZQ9UBR2 303 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 MEGF8Q7Z7M0 2845 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 TRRAPQ9Y4A5 3859 aa15.93■□□□□ 0.14
COL9A3-206ENST00000466532 C5orf63A6NC05 138 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 POM121CA8CG34 1229 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 C3orf80F5H4A9 247 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 LGALS8O00214 317 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 PTBP3O95758 552 aaKnown RBP15.92■□□□□ 0.14
COL9A3-206ENST00000466532 GASTP01350 101 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 ENTPD1P49961 510 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 PRKXP51817 358 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 TAF13Q15543 124 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF362Q5T0B9 420 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-206ENST00000466532 CD276Q5ZPR3 534 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 C16orf87Q6PH81 154 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 CYP2R1Q6VVX0 501 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 RASSF6Q6ZTQ3 369 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 SPATC1Q76KD6 591 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 LNX2Q8N448 690 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms